Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL512782.1-201ENST00000603093 364 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AL035411.2-201ENST00000604022 421 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC104687.2-201ENST00000604442 342 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX4O60224 AL158163.2-201ENST00000619110 700 ntBASIC4.22□□□□□ -1.73
SSX4O60224 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX4O60224 AC019206.1-201ENST00000621938 425 ntBASIC4.22□□□□□ -1.73
SSX4O60224 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC012414.7-202ENST00000622705 1090 ntBASIC4.22□□□□□ -1.73
SSX4O60224 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX4O60224 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX4O60224 AC008993.2-201ENST00000631744 806 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX4O60224 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSX4O60224 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSX4O60224 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.21□□□□□ -1.73
SSX4O60224 AL355578.1-201ENST00000607405 1328 ntBASIC4.21□□□□□ -1.73
SSX4O60224 AC099786.3-201ENST00000565735 1410 ntBASIC4.21□□□□□ -1.73
SSX4O60224 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSX4O60224 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSX4O60224 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSX4O60224 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 AC079741.1-201ENST00000321498 212 ntBASIC4.21□□□□□ -1.74
SSX4O60224 RNU4-68P-201ENST00000364314 141 ntBASIC4.21□□□□□ -1.74
SSX4O60224 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX4O60224 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 Z75741.2-201ENST00000417272 1167 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC069213.2-201ENST00000420238 366 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC009480.2-201ENST00000422916 432 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 AC007559.1-201ENST00000428736 355 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC023347.2-201ENST00000433994 462 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 EEF1A1P39-201ENST00000440791 250 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.21□□□□□ -1.74
SSX4O60224 AL162388.1-201ENST00000450912 352 ntBASIC4.21□□□□□ -1.74
SSX4O60224 OFD1P3Y-201ENST00000453312 783 ntBASIC4.21□□□□□ -1.74
SSX4O60224 MTCO3P35-201ENST00000485582 781 ntBASIC4.21□□□□□ -1.74
SSX4O60224 DYNLL1P6-201ENST00000503440 264 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC048346.1-201ENST00000510247 144 ntBASIC4.21□□□□□ -1.74
SSX4O60224 KRT19P6-201ENST00000510983 209 ntBASIC4.21□□□□□ -1.74
SSX4O60224 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
SSX4O60224 RNA5SP392-201ENST00000516905 112 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.21□□□□□ -1.74
SSX4O60224 AC012339.2-201ENST00000523996 453 ntBASIC4.21□□□□□ -1.74
SSX4O60224 OR5M2P-201ENST00000529003 936 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX4O60224 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX4O60224 MIR4512-201ENST00000583257 77 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC017100.2-201ENST00000584628 355 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC011477.5-201ENST00000586571 259 ntBASIC4.21□□□□□ -1.74
SSX4O60224 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 AC006116.5-201ENST00000591936 559 ntBASIC4.21□□□□□ -1.74
SSX4O60224 VN1R83P-201ENST00000595685 445 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC068790.7-201ENST00000602347 528 ntBASIC4.21□□□□□ -1.74
SSX4O60224 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 LINC02211-204ENST00000642024 1070 ntBASIC4.21□□□□□ -1.74
SSX4O60224 AC010300.1-201ENST00000600671 5134 ntBASIC4.21□□□□□ -1.74
SSX4O60224 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX4O60224 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX4O60224 DCAF13P3-201ENST00000561147 1334 ntBASIC4.21□□□□□ -1.74
SSX4O60224 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SSX4O60224 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSX4O60224 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms