Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC093281.2-201ENST00000510153 597 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC026412.2-201ENST00000512270 1075 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RNY4P37-201ENST00000516225 96 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP234-201ENST00000517173 224 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092470.1-201ENST00000546187 132 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 OR1F2P-201ENST00000570470 933 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC106791.2-201ENST00000604680 391 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL008729.2-201ENST00000606393 473 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL627230.1-201ENST00000613077 211 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC243773.3-201ENST00000613270 256 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL139418.1-201ENST00000613613 177 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 EIF3FP1-201ENST00000613970 806 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL591926.8-201ENST00000616876 211 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC131238.1-201ENST00000617135 328 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL603755.1-201ENST00000619504 163 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC103706.2-201ENST00000638080 240 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 ZNF542P-204ENST00000482727 1305 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL079343.1-201ENST00000572358 1771 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 MTND4P34-201ENST00000572715 1371 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP104-201ENST00000362605 328 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 SNORA2.3-201ENST00000383920 135 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR550A3-201ENST00000390735 95 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 SNRPEP2-201ENST00000397592 279 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL078599.1-201ENST00000402075 293 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL024474.1-201ENST00000404655 591 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 USP9YP33-201ENST00000412220 421 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 GJA6P-201ENST00000415117 1042 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 PTP4A1P5-201ENST00000420305 455 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC00993-201ENST00000420453 540 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 USP9YP35-201ENST00000435696 412 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MTCYBP3-201ENST00000445588 1137 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL39P6-201ENST00000448289 150 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL133217.1-201ENST00000450980 425 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SL591P-201ENST00000496150 292 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC114981.1-201ENST00000503897 678 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 CENPUP2-201ENST00000555897 1186 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR4691-201ENST00000583764 85 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 BNIP3P24-201ENST00000593398 557 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL513477.2-201ENST00000607858 568 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC000123.2-201ENST00000623124 461 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 OR8B1P-202ENST00000641132 1178 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A3BPQ9Y5P4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC130650.2-201ENST00000618736 2403 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RNA5SP123-201ENST00000363244 119 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 Y_RNA.169-201ENST00000363745 96 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RNU1-130P-201ENST00000363930 160 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 SNORA51.6-201ENST00000384151 125 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RNU6-253P-201ENST00000384730 105 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AL139128.1-201ENST00000413921 941 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 TMBIM7P-201ENST00000418074 855 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms