Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MTND2P14-201ENST00000482139 351 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 DSTNP2-201ENST00000504533 515 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC010486.2-201ENST00000505572 483 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC025674.1-201ENST00000507074 324 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC125611.1-201ENST00000549563 229 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 MIR4444-1-201ENST00000581696 74 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 MIR4444-2-201ENST00000584390 74 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 MTND3P19-201ENST00000603825 345 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 Z94722.1-201ENST00000604328 474 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 COX6CP4-201ENST00000605798 228 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 AC023043.4-201ENST00000612081 449 ntBASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAI2Q9Y5P3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.65□□□□□ -1.66
RAI2Q9Y5P3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC021146.4-201ENST00000309229 279 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 OR56B2P-201ENST00000317102 954 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 NACA3P-201ENST00000359690 648 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 MIR208A-201ENST00000362287 71 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RNU1-87P-201ENST00000363727 170 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RNU6-413P-201ENST00000384115 107 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RNA5SP397-201ENST00000391323 118 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RNU2-22P-201ENST00000411266 212 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 OR4K6P-201ENST00000416478 897 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 MTND2P18-201ENST00000419962 1030 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RPF2P1-201ENST00000424137 906 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 CBX1P1-201ENST00000440184 427 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL935212.3-201ENST00000450729 284 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 ISCUP1-201ENST00000454451 448 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL591473.1-201ENST00000464297 313 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC107015.1-201ENST00000466902 747 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC091959.2-201ENST00000477363 321 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC113347.3-201ENST00000509113 148 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC010486.3-201ENST00000511602 785 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 RNA5SP143-201ENST00000516936 115 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC083923.1-201ENST00000523708 376 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 CYCSP29-201ENST00000533731 318 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 POLR2KP1-201ENST00000553226 168 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC093591.2-201ENST00000565254 3843 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 MIR3158-1-201ENST00000583596 81 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AP001269.3-201ENST00000588718 329 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC006272.2-201ENST00000594725 163 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL133338.2-201ENST00000604292 736 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL451064.1-201ENST00000607718 471 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC022106.2-201ENST00000620114 757 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AP003497.2-201ENST00000624220 967 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC017037.3-201ENST00000625016 472 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC126323.6-202ENST00000568092 3511 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC015813.6-201ENST00000624409 5808 ntBASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RAI2Q9Y5P3 AC104454.1-201ENST00000421341 1401 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms