Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC069366.1-201ENST00000583159 838 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC114878.2-201ENST00000604863 1251 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AP000255.1-201ENST00000610276 676 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 MIR6758-201ENST00000620653 63 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 AC000123.2-201ENST00000623124 461 ntBASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAPPC4Q9Y296 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.65□□□□□ -1.82
TRAPPC4Q9Y296 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRAPPC4Q9Y296 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRAPPC4Q9Y296 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRAPPC4Q9Y296 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.82
TRAPPC4Q9Y296 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SNORD51.1-201ENST00000365405 77 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC068538.1-201ENST00000376856 336 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-225P-201ENST00000384613 103 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 ATP5F1P4-201ENST00000397288 746 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL022722.2-201ENST00000402519 180 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 MIR1251-201ENST00000408552 70 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 HSPE1P12-201ENST00000412576 301 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 TPT1P2-201ENST00000413105 503 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL138785.1-201ENST00000425821 331 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 RPS6P12-201ENST00000432491 726 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 MTCO3P43-201ENST00000440974 771 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 RPL7P19-201ENST00000469948 618 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SUMO1P1-201ENST00000497904 306 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 CDH12P2-201ENST00000504393 298 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 KRT19P6-201ENST00000510983 209 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC108120.2-201ENST00000512973 294 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC091516.1-201ENST00000549191 703 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC023158.1-201ENST00000561632 1025 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC136624.4-201ENST00000573044 370 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL451044.1-201ENST00000604867 238 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL590392.1-201ENST00000604960 446 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL355802.4-201ENST00000607635 548 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 OR6R2P-201ENST00000609216 300 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC083809.1-201ENST00000615051 472 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL391261.4-201ENST00000616012 481 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC112484.5-201ENST00000624189 228 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AC095050.2-201ENST00000510748 1458 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 Z82217.1-201ENST00000625157 8149 ntBASIC3.65□□□□□ -1.83
TRAPPC4Q9Y296 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-304P-201ENST00000364855 107 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RNU11-4P-201ENST00000391149 133 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AL049693.1-201ENST00000402760 611 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 HMGB3P19-201ENST00000403971 560 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 MTCYBP12-201ENST00000440559 1134 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 AC092809.1-201ENST00000441469 474 ntBASIC3.64□□□□□ -1.83
TRAPPC4Q9Y296 RPS4XP4-201ENST00000443195 763 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms