Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RNA5SP123-201ENST00000363244 119 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RNU6-1122P-201ENST00000384449 107 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 MIR589-201ENST00000385238 99 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 LRRC37BP1-201ENST00000398851 714 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL078599.1-201ENST00000402075 293 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RN7SKP114-201ENST00000410327 279 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 RAP1BP1-201ENST00000412709 553 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL807761.1-201ENST00000417622 171 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RPS25P9-201ENST00000435591 252 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL357520.1-201ENST00000441557 453 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 KNOP1P3-201ENST00000446933 426 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 TRGVB-201ENST00000453257 471 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC092757.1-201ENST00000467293 467 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC007686.1-201ENST00000488511 463 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 RN7SL244P-201ENST00000493405 297 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RNY4P37-201ENST00000516225 96 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 OR5AK1P-201ENST00000524837 922 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC008127.2-201ENST00000549925 1075 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 PCNPP1-201ENST00000552501 511 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 MIR3934-201ENST00000579806 107 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC011487.3-201ENST00000593607 453 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC011626.1-201ENST00000604710 562 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 IMMP1LP1-201ENST00000605170 488 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 FAM25E-202ENST00000608562 189 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC245297.2-201ENST00000610119 565 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AL139418.1-201ENST00000613613 177 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC091953.3-201ENST00000623220 236 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN1Q9P244 MAPK10-349ENST00000641767 3661 ntBASIC4.73□□□□□ -1.65
LRFN1Q9P244 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRFN1Q9P244 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC090229.1-201ENST00000590983 1609 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC009951.1-201ENST00000623674 2614 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 RN7SKP145-201ENST00000363291 303 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 RNU5A-2P-201ENST00000384337 116 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN1Q9P244 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN1Q9P244 AC073648.4-201ENST00000442655 781 ntBASIC4.72□□□□□ -1.65
LRFN1Q9P244 RPL21P133-201ENST00000443666 476 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms