Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 S100A11P1-201ENST00000477525 312 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 RPS4XP6-201ENST00000477670 797 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AL121603.1-201ENST00000553815 142 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AL592291.1-201ENST00000403830 352 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 RPL7AP73-201ENST00000413490 353 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AL645931.1-201ENST00000439737 410 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC073522.1-201ENST00000483312 377 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 MIR449C-201ENST00000516047 92 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 PRELID3BP3-201ENST00000584963 545 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC140134.1-201ENST00000511830 3544 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 THAP12P8-201ENST00000447914 2115 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 SNORD17-201ENST00000390930 237 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 RNA5SP249-201ENST00000516127 99 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 CYCSP28-201ENST00000534284 321 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AP000873.5-201ENST00000533906 236 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 AC025754.2-201ENST00000606491 432 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 U4.6-201ENST00000621618 127 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 IGHVIII-44-202ENST00000636235 289 ntBASIC3.43□□□□□ -1.86
CHD8Q9HCK8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CHD8Q9HCK8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 NEAT1-202ENST00000501122 22743 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 MIR921-201ENST00000401133 56 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC140076.1-201ENST00000449897 361 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC097262.1-201ENST00000452559 548 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 PTGES3P3-201ENST00000511479 482 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC084759.1-201ENST00000561168 290 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL354760.1-201ENST00000608357 643 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL731532.2-201ENST00000623542 1953 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL158827.2-201ENST00000602494 330 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL354976.1-201ENST00000613843 387 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC026422.1-201ENST00000623961 452 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AL691447.3-201ENST00000635020 330 ntBASIC3.42□□□□□ -1.86
CHD8Q9HCK8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD8Q9HCK8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC007159.1-201ENST00000566529 4706 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.41□□□□□ -1.86
CHD8Q9HCK8 VN1R25P-201ENST00000443385 738 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 AC078785.3-201ENST00000476607 425 ntBASIC3.41□□□□□ -1.86
CHD8Q9HCK8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms