Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TPT1P13-201ENST00000449760 499 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 SNRPGP5-201ENST00000456003 220 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 RNU6-751P-201ENST00000516382 101 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 RAB9BP1-201ENST00000519581 626 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 C1GALT1P3-201ENST00000522049 819 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 COX6B1P6-201ENST00000522347 255 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 MIR3138-201ENST00000585238 82 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 ARF4P1-201ENST00000605447 541 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 C2orf27A-204ENST00000623058 969 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 AC104820.1-201ENST00000624183 307 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 HSPA8P19-201ENST00000505359 1517 ntBASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRC40Q9H9A6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 RNU11-4P-201ENST00000391149 133 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 RNU2-65P-201ENST00000410162 185 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC096638.2-201ENST00000434965 711 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 USP9YP7-201ENST00000436723 430 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 HMGB3P22-202ENST00000451823 572 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 USP9YP32-201ENST00000452432 430 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 FABP3P2-201ENST00000453169 399 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AL133477.1-201ENST00000457472 514 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC006463.2-201ENST00000473326 348 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 IGHV3-32-201ENST00000519182 355 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC007424.1-203ENST00000554613 687 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AL445567.2-201ENST00000618935 498 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 AL359715.5-201ENST00000623431 443 ntBASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRC40Q9H9A6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRRC40Q9H9A6 ZNF33CP-201ENST00000432492 2030 ntBASIC4.09□□□□□ -1.76
LRRC40Q9H9A6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
LRRC40Q9H9A6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 HMGB3P19-201ENST00000403971 560 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 RNU2-6P-201ENST00000411404 190 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 LINC01347-201ENST00000417964 355 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AL391219.1-201ENST00000422570 483 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 CHIAP3-201ENST00000423668 1133 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 OR5BE1P-201ENST00000425977 939 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC087650.1-201ENST00000431445 468 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 MRPL50P1-201ENST00000431951 384 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 NMD3P1-201ENST00000439704 1488 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC097499.1-201ENST00000444277 208 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 RSL24D1P2-201ENST00000445584 366 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 Vault.1-201ENST00000516474 102 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 RN7SKP234-201ENST00000517173 224 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 MRPS35P3-201ENST00000603189 709 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AC015849.2-201ENST00000605738 409 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 BX322635.1-201ENST00000605804 496 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 AL645927.2-201ENST00000618350 349 ntBASIC4.08□□□□□ -1.76
LRRC40Q9H9A6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms