Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR11H5P-201ENST00000554039 926 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 MIR3176-201ENST00000582210 90 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 OR7E18P-201ENST00000592589 702 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 AC018462.2-201ENST00000605375 395 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 U1.41-201ENST00000617626 165 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-CQ95604 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
HLA-CQ95604 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
HLA-CQ95604 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.94□□□□□ -1.3
HLA-CQ95604 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.94□□□□□ -1.3
HLA-CQ95604 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-CQ95604 AC010886.1-201ENST00000437380 2869 ntBASIC6.94□□□□□ -1.3
HLA-CQ95604 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 AC027575.3-201ENST00000583058 2747 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AL359922.2-201ENST00000581788 3017 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 THAP12P7-201ENST00000520248 2290 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 THAP12P4-201ENST00000528321 2266 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 AL592148.3-201ENST00000608771 2646 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 RNU6-874P-201ENST00000362390 105 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.93□□□□□ -1.3
HLA-CQ95604 RNU4-46P-201ENST00000410818 138 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC080125.1-201ENST00000414888 684 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 MTATP6P29-201ENST00000415057 132 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AL663061.1-201ENST00000416625 580 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AC091390.2-201ENST00000432573 374 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AC105402.2-201ENST00000438503 358 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC008571.1-201ENST00000467232 300 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC008526.1-201ENST00000509149 338 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC018797.3-201ENST00000513388 1241 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 RNU6-408P-201ENST00000515910 100 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AL133399.1-201ENST00000527476 298 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC135001.1-201ENST00000544546 283 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC092375.1-201ENST00000550410 637 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AC007375.1-201ENST00000554513 578 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AC092747.3-201ENST00000603769 301 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AL352984.2-202ENST00000613699 155 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AC103705.1-201ENST00000619013 241 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 AL138713.1-201ENST00000624026 2130 ntBASIC6.93□□□□□ -1.3
HLA-CQ95604 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-CQ95604 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HLA-CQ95604 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-CQ95604 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-CQ95604 UG0898H09-202ENST00000623646 7040 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 SHQ1P1-201ENST00000437111 1544 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms