Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 HSPE1P23-201ENST00000509838 286 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC048346.1-201ENST00000510247 144 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 MTCO2P32-201ENST00000514865 403 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC007954.1-201ENST00000554198 494 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC012213.3-201ENST00000577199 777 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC006116.3-201ENST00000592968 361 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 NTAN1P1-201ENST00000603150 646 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AL121932.1-201ENST00000605542 214 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 RN7SKP299-201ENST00000606679 301 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC004948.1-201ENST00000609858 672 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC008083.4-201ENST00000615076 444 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AL136981.2-201ENST00000617319 734 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AC234782.5-201ENST00000617723 324 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4AQ8WYN0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 ASNSP1-204ENST00000641977 1664 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RNU5D-1-201ENST00000363299 116 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 SNORA51.12-201ENST00000384448 134 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 Z97832.1-201ENST00000402490 328 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RNU6-920P-201ENST00000410926 92 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NPM1P11-201ENST00000417106 855 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC073069.1-201ENST00000428657 441 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 DLGAP5P1-201ENST00000430307 464 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MUPP-201ENST00000438111 566 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RPS26P2-201ENST00000440331 348 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MTND2P19-201ENST00000449129 1012 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 VN1R32P-201ENST00000452234 905 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RPL12P26-201ENST00000452430 487 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RPL23AP71-201ENST00000470966 469 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 SETP11-201ENST00000473027 690 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NCOR1P1-202ENST00000486162 291 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 DSTNP2-201ENST00000504533 515 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 HMGB3P13-201ENST00000511263 607 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RNA5SP92-201ENST00000516437 110 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RNA5SP135-201ENST00000517019 125 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NDUFA5P2-201ENST00000519723 344 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MTCYBP20-201ENST00000524239 1129 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC079075.1-201ENST00000559543 878 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MIR3176-201ENST00000582210 90 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC133552.5-201ENST00000604266 540 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms