Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 AC093311.1-201ENST00000506586 2021 ntBASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 AC008555.1-201ENST00000561778 2757 ntBASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 TMCC1P1-201ENST00000518897 1980 ntBASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNIP1Q8TAD8 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RN7SKP107-201ENST00000364157 290 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 Y_RNA.539-201ENST00000384635 107 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 MIR450B-201ENST00000401182 78 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RN7SKP108-201ENST00000411367 328 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 MRPS18CP6-201ENST00000423587 223 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RPL23AP19-201ENST00000436229 369 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PPIAP20-201ENST00000449839 135 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AL162388.1-201ENST00000450912 352 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AL445687.2-201ENST00000458156 728 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC117395.2-201ENST00000463122 1128 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RPL21P71-201ENST00000465598 459 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC094085.1-201ENST00000468914 584 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC055855.1-201ENST00000489563 579 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC112484.3-201ENST00000505910 329 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RNU1-54P-201ENST00000517181 120 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 EEF1B2P2-201ENST00000519625 676 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 SULT1C2P1-202ENST00000562418 459 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC002310.3-201ENST00000569728 723 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 uc_338.31-201ENST00000615595 186 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 uc_338.12-201ENST00000616344 181 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 CDY19P-201ENST00000411668 1613 ntBASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNIP1Q8TAD8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL121949.2-201ENST00000403446 1548 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC068860.1-201ENST00000623701 3736 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms