Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC136618.2-201ENST00000575091 400 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 CU639417.4-201ENST00000623928 207 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AC090617.10-201ENST00000624308 134 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AC093591.3-201ENST00000634516 308 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AC024560.2-201ENST00000507981 1497 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AP004607.3-201ENST00000530354 3915 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 AL031985.3-201ENST00000565390 2449 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 MRE11P1-201ENST00000464884 2127 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 MTCO1P12-201ENST00000414273 1543 ntBASIC6.76□□□□□ -1.33
NEDD1Q8NHV4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 FARSBP1-201ENST00000435808 1778 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 UGT2B24P-201ENST00000514441 1597 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RNU5E-8P-201ENST00000363502 116 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RNU6-74P-201ENST00000384235 107 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 SNORD116-29-201ENST00000384516 83 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RNU6-308P-201ENST00000390957 107 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 PEX12P1-201ENST00000400284 1048 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL121977.1-201ENST00000401636 979 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL162578.1-201ENST00000406202 378 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 NPM1P40-201ENST00000412758 733 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL645937.1-202ENST00000421799 937 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 OR5W1P-201ENST00000423705 938 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RPS3AP38-201ENST00000435889 763 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 HMGB3P12-201ENST00000438745 556 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 DNAJC19P5-201ENST00000443295 316 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RPSAP39-201ENST00000467439 883 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 OR5D2P-201ENST00000524390 911 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC063950.1-201ENST00000552036 308 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 NIFKP8-201ENST00000560500 874 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC055876.1-202ENST00000567053 138 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 FO393422.1-201ENST00000603908 708 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC080078.3-201ENST00000605407 463 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC069542.2-201ENST00000624816 216 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC138649.5-201ENST00000637456 137 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 AC068769.1-201ENST00000474767 2426 ntBASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD1Q8NHV4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 SRRM1P3-201ENST00000426911 2678 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 RNA5SP131-201ENST00000365452 119 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 Y_RNA.481-201ENST00000384373 102 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 SNORA19-201ENST00000384737 128 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 AC004690.1-201ENST00000418216 328 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 NENFP1-201ENST00000419476 466 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 PIGFP2-201ENST00000421400 651 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 RPL12P16-201ENST00000431098 498 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 SEPT7P5-201ENST00000434048 306 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 HMGB1P18-201ENST00000438801 619 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 EEF1B2P6-201ENST00000445713 673 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 AC073909.1-201ENST00000447112 999 ntBASIC6.74□□□□□ -1.33
NEDD1Q8NHV4 OR7E116P-201ENST00000448529 957 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms