Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC015802.5-201ENST00000607478 399 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC083899.2-201ENST00000423285 1376 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 RNA5SP126-201ENST00000365092 109 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 Y_RNA.510-201ENST00000384511 114 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 MIR128-1-201ENST00000384921 82 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 VDAC2P1-201ENST00000399358 958 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 SNORA3C-201ENST00000408792 125 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 GSTM3P2-201ENST00000412746 530 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL159987.2-201ENST00000432754 307 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 FCF1P7-201ENST00000451185 558 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL139099.1-201ENST00000497398 403 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 PPBPP1-201ENST00000510807 373 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 MIR5187-201ENST00000583479 76 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC067852.3-201ENST00000589177 561 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL390816.3-201ENST00000604527 1066 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC012314.7-201ENST00000619693 93 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 MIR6852-201ENST00000621699 66 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 U6.105-201ENST00000637379 88 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 USP8P1-201ENST00000494673 3183 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 RPL21P23-201ENST00000446654 460 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC010374.1-201ENST00000503762 1237 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 RNA5SP208-201ENST00000516156 78 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL121576.1-201ENST00000556055 276 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AL159169.3-201ENST00000608871 561 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 AC007656.2-201ENST00000624902 4547 ntBASIC1.15□□□□□ -2.23
SYNE1Q8NF91 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SYNE1Q8NF91 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPL5P16-201ENST00000471467 790 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPS29P19-201ENST00000479709 171 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 BRDTP1-201ENST00000605735 677 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MAPK10-253ENST00000641010 4072 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL161912.2-201ENST00000565707 3007 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RNU6-301P-201ENST00000384277 107 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC025750.2-201ENST00000442609 450 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RPL7P24-201ENST00000493052 752 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC074250.1-201ENST00000511117 192 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC091516.1-201ENST00000549191 703 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC097504.1-201ENST00000515103 2415 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 CDY3P-201ENST00000454543 1618 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 MTND4LP20-201ENST00000402379 270 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AP000907.1-201ENST00000428428 510 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL158071.1-201ENST00000430315 461 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 ZYG11AP1-201ENST00000430329 837 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 NPM1P17-201ENST00000479221 602 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AL360157.1-201ENST00000565962 87 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC009159.1-201ENST00000618386 642 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 AC012020.1-201ENST00000624541 1728 ntBASIC1.14□□□□□ -2.23
SYNE1Q8NF91 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
SYNE1Q8NF91 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms