Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 CBX1P3-201ENST00000413296 527 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 RPL26P28-201ENST00000451325 435 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 RPL23AP73-201ENST00000492507 471 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 HSPD1P15-201ENST00000505573 1122 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 ASNSP4-201ENST00000511103 447 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 AL645937.1-201ENST00000641739 1652 ntBASIC5.45□□□□□ -1.54
VPS8Q8N3P4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 OTUD4P1-201ENST00000237841 3067 ntBASIC5.44□□□□□ -1.54
VPS8Q8N3P4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 Y_RNA.333-201ENST00000365274 102 ntBASIC5.44□□□□□ -1.54
VPS8Q8N3P4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AL391417.1-201ENST00000404100 426 ntBASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 NARSP2-201ENST00000518524 679 ntBASIC5.44□□□□□ -1.54
VPS8Q8N3P4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VPS8Q8N3P4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC017083.1-201ENST00000428093 483 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC005300.1-201ENST00000428401 373 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC097713.2-201ENST00000430199 356 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 FCF1P3-201ENST00000496394 590 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 SRGNP1-201ENST00000603392 451 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC096577.2-201ENST00000611455 153 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC093849.1-201ENST00000563631 2209 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 CDY3P-201ENST00000454543 1618 ntBASIC5.43□□□□□ -1.54
VPS8Q8N3P4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS8Q8N3P4 AC032011.1-201ENST00000611703 1549 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 RNVU1-14-201ENST00000384770 164 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC005326.1-201ENST00000429197 123 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 HMGB3P9-201ENST00000441799 583 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AP000563.1-201ENST00000490865 758 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 CYP2C60P-201ENST00000566088 139 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC016590.3-201ENST00000611171 753 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 AC058791.1-201ENST00000608412 3198 ntBASIC5.42□□□□□ -1.54
VPS8Q8N3P4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS8Q8N3P4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RNA5SP267-201ENST00000364893 126 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RPL17P50-201ENST00000396131 546 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RPL7P49-201ENST00000471402 708 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 ACTG1P13-201ENST00000486987 1043 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RNU2-27P-201ENST00000516185 142 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 IGKV2-26-201ENST00000518305 343 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 MIR5186-201ENST00000577504 120 ntBASIC5.41□□□□□ -1.54
VPS8Q8N3P4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS8Q8N3P4 RNA5SP72-201ENST00000364442 117 ntBASIC5.4□□□□□ -1.54
VPS8Q8N3P4 RN7SKP56-201ENST00000410513 331 ntBASIC5.4□□□□□ -1.54
VPS8Q8N3P4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 MTCO3P16-201ENST00000454456 754 ntBASIC5.4□□□□□ -1.54
VPS8Q8N3P4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 RN7SL601P-201ENST00000471221 293 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms