Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SNORA5B-201ENST00000363786 132 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SDCBPP2-201ENST00000424643 885 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC005002.1-201ENST00000447458 540 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RN7SKP222-201ENST00000410651 315 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RN7SKP97-201ENST00000410966 333 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 VN1R40P-201ENST00000455196 941 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RPL7P48-201ENST00000461513 746 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 STMN1P2-201ENST00000508435 439 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RPL21P7-201ENST00000557463 483 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 MIR8069-1-201ENST00000616627 86 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 MIR8069-2-201ENST00000621412 86 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC005005.4-201ENST00000623789 16698 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ZYG11AP1-201ENST00000430329 837 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 RPL32P28-201ENST00000443577 397 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC008489.1-201ENST00000524271 483 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC005183.1-201ENST00000603687 1979 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AL353705.1-201ENST00000433468 480 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AL109933.2-201ENST00000452651 260 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 Z95327.2-201ENST00000414579 1873 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC138393.1-206ENST00000540997 1886 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 LIPT1P1-201ENST00000415870 1186 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 FDX1P2-201ENST00000450769 375 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC103783.1-201ENST00000520506 373 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC092868.3-201ENST00000560515 784 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 MIR4276-201ENST00000584832 70 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC103881.1-201ENST00000603476 538 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AP003355.3-201ENST00000623465 114 ntBASIC2.43□□□□□ -2.02
CSMD3Q7Z407 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.43□□□□□ -2.02
CSMD3Q7Z407 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 NACAP7-201ENST00000407371 609 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 BTF3P9-201ENST00000418784 283 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 HSPE1P27-201ENST00000430808 296 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 NDUFB1P1-201ENST00000435191 180 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ATP5C1P1-201ENST00000441945 895 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC097262.1-201ENST00000452559 548 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RPS4XP2-201ENST00000458402 793 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC026784.1-201ENST00000507986 352 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RN7SKP46-201ENST00000515942 234 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC012603.1-201ENST00000606424 528 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 Xist_exon4.1-201ENST00000615964 126 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms