Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 HMGB3P22-202ENST00000451823 572 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 RPL7P38-201ENST00000488396 739 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 IGKV2-26-201ENST00000518305 343 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC090136.1-201ENST00000520009 240 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC008489.1-201ENST00000524271 483 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC092747.2-201ENST00000545069 983 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 SULT1C2P2-201ENST00000562517 294 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC138932.5-201ENST00000617759 563 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC019072.1-201ENST00000604535 1551 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 SNORD74.4-201ENST00000364129 80 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AJ239321.1-201ENST00000424255 564 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AL136126.1-201ENST00000473603 402 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 RN7SKP289-201ENST00000517244 295 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC124312.4-201ENST00000605533 310 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC073657.2-201ENST00000605661 303 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC084036.1-201ENST00000609190 508 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 NPM1P39-201ENST00000449818 867 ntBASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 RPS26P15-201ENST00000488067 348 ntBASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPAQ5VT25 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 AL031121.1-201ENST00000406553 254 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 RPL21P6-201ENST00000479171 504 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 AC080014.1-201ENST00000496877 1201 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 HMGB1P21-201ENST00000502313 581 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 AC009464.1-201ENST00000615731 469 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 MTCO1P46-201ENST00000451639 1491 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 OR10J6P-201ENST00000289731 930 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 Y_RNA.111-201ENST00000363248 100 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 RNA5SP229-201ENST00000410809 99 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 OR4K6P-201ENST00000416478 897 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 MTCO1P45-201ENST00000431457 267 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 RPSAP41-201ENST00000439695 860 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 HMGB3P13-201ENST00000511263 607 ntBASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDC42BPAQ5VT25 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 MIR1289-1-201ENST00000408836 144 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 UBE2V1P1-201ENST00000430836 445 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 RPS20P1-201ENST00000434853 354 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 NANOGNBP1-201ENST00000448444 480 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 AC097262.1-201ENST00000452559 548 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 UBE2DNL-203ENST00000474922 222 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 NPM1P17-201ENST00000479221 602 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 RN7SL504P-201ENST00000494496 287 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 Z95331.1-201ENST00000623075 23112 ntBASIC5.25□□□□□ -1.57
CDC42BPAQ5VT25 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDC42BPAQ5VT25 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDC42BPAQ5VT25 RPS24P12-201ENST00000402084 394 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms