Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC016877.3-201ENST00000606778 504 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AP000238.1-201ENST00000608759 426 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL445423.1-201ENST00000609941 536 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RNU6-156P-201ENST00000621869 107 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 OR1S1-201ENST00000624470 978 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 ERCC6-202ENST00000374127 1782 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC008758.3-201ENST00000507003 1829 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 OR10J6P-201ENST00000289731 930 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 MIR16-1-201ENST00000385271 89 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 TMSB4XP8-201ENST00000402089 135 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 RNA5SP345-201ENST00000410646 108 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 TMSB4XP6-201ENST00000415187 135 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 MTND2P18-201ENST00000419962 1030 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 TMSB4XP1-201ENST00000424567 135 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL645939.1-201ENST00000453429 797 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 RPL23AP44-201ENST00000482216 473 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC069528.1-202ENST00000482888 637 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC020890.1-201ENST00000491837 504 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 RNU6-488P-201ENST00000515918 99 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 OR5M2P-201ENST00000529003 936 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC022882.1-201ENST00000532142 501 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC137768.1-201ENST00000549998 553 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC004217.3-201ENST00000551552 878 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC080013.6-201ENST00000606185 215 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AL583856.2-201ENST00000606298 543 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC024257.5-201ENST00000612739 531 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 ZNF663P-202ENST00000641770 1131 ntBASIC5.5□□□□□ -1.53
LONRF3Q496Y0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.5□□□□□ -1.53
LONRF3Q496Y0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 OR5H2-201ENST00000355273 945 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 MIR124-3-201ENST00000384866 87 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 DSTNP4-201ENST00000399472 474 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL592291.1-201ENST00000403830 352 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 NUP35P2-201ENST00000416748 943 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 ELOCP9-201ENST00000418624 239 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 RAC1P8-201ENST00000427086 527 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 RAB11AP1-201ENST00000442978 646 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 CEACAMP9-201ENST00000442990 513 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC104306.1-201ENST00000449702 371 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 NPM1P13-201ENST00000452663 865 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.49□□□□□ -1.53
LONRF3Q496Y0 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC109471.1-201ENST00000511631 612 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 MTCO3P28-201ENST00000513351 515 ntBASIC5.49□□□□□ -1.53
LONRF3Q496Y0 AC138938.1-201ENST00000515431 782 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms