Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNU6-1279P-201ENST00000383917 103 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 AC017079.2-201ENST00000416102 485 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 OR2X1P-201ENST00000421144 687 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 RPF2P1-201ENST00000424137 906 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 YWHAQP9-201ENST00000445891 512 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 AC109458.1-201ENST00000508858 316 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CACNA1SQ13698 PHBP14-201ENST00000512887 367 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 RNU2-27P-201ENST00000516185 142 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 MIR4276-201ENST00000584832 70 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 AC006386.2-201ENST00000624491 75 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 AC012005.1-201ENST00000624575 75 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CACNA1SQ13698 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CACNA1SQ13698 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CACNA1SQ13698 AP000542.2-201ENST00000623199 6179 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC096638.2-201ENST00000434965 711 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 MRPS35P3-201ENST00000603189 709 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 BMS1P3-201ENST00000372011 932 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AL357075.1-201ENST00000404107 726 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 RN7SKP53-201ENST00000411337 315 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 OSTCP5-201ENST00000425293 453 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 NANOGNBP1-201ENST00000448444 480 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 RN7SKP83-201ENST00000516512 178 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CACNA1SQ13698 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 SULT1C2P2-201ENST00000562517 294 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC022146.1-201ENST00000595307 847 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 MIR7112-201ENST00000616126 65 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 AC069209.1-201ENST00000619282 651 ntBASIC4.43□□□□□ -1.7
CACNA1SQ13698 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CACNA1SQ13698 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 FRG1CP-201ENST00000358464 769 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 RNA5SP424-201ENST00000390988 115 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 BX323014.1-201ENST00000412876 237 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 RPSAP41-201ENST00000439695 860 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 NPM1P29-201ENST00000483112 803 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 SUMO2P20-201ENST00000520803 283 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC011270.1-201ENST00000558606 583 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AP005262.1-201ENST00000582646 997 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC091905.1-201ENST00000624400 311 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CACNA1SQ13698 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 AC083843.3-201ENST00000623679 2186 ntBASIC4.42□□□□□ -1.7
CACNA1SQ13698 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.42□□□□□ -1.7
CACNA1SQ13698 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 Y_RNA.510-201ENST00000384511 114 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 AC002524.1-201ENST00000411687 547 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 RPL7L1P1-201ENST00000448259 785 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 RBMY2UP-201ENST00000453474 324 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 AC098824.1-201ENST00000453565 980 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 AP000942.1-201ENST00000463969 747 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms