Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPL7P11-201ENST00000437586 658 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 TAF9P1-201ENST00000445421 515 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL360221.1-201ENST00000445989 335 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC007327.1-201ENST00000447461 264 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC009961.3-201ENST00000449832 765 ntBASIC4.4□□□□□ -1.71
LTBQ06643 VN1R32P-201ENST00000452234 905 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC097262.1-201ENST00000452559 548 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL035407.2-201ENST00000454090 378 ntBASIC4.4□□□□□ -1.71
LTBQ06643 TAF9P2-201ENST00000454958 515 ntBASIC4.4□□□□□ -1.71
LTBQ06643 CDC42P1-201ENST00000456658 548 ntBASIC4.4□□□□□ -1.71
LTBQ06643 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
LTBQ06643 SYPL1P1-201ENST00000473622 768 ntBASIC4.4□□□□□ -1.71
LTBQ06643 RPL21P129-201ENST00000491732 478 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC021146.8-201ENST00000507455 733 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBQ06643 RFPL1S-203ENST00000539579 330 ntBASIC4.4□□□□□ -1.71
LTBQ06643 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LTBQ06643 AL391156.1-201ENST00000554965 554 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC027807.1-201ENST00000559921 996 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AADACP1-206ENST00000561502 1193 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 AC090616.2-202ENST00000584248 222 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 AL590229.1-201ENST00000603497 542 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC103792.1-201ENST00000603591 919 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC080078.2-201ENST00000603766 501 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC010738.1-201ENST00000604970 987 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC010424.2-201ENST00000607594 443 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL135786.2-201ENST00000608422 615 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC103591.3-201ENST00000608684 209 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL592148.2-201ENST00000612210 372 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC122133.1-201ENST00000613964 233 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC105227.2-201ENST00000615075 605 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC019206.1-201ENST00000621938 425 ntBASIC4.4□□□□□ -1.71
LTBQ06643 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.4□□□□□ -1.71
LTBQ06643 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LTBQ06643 TTC39DP-201ENST00000416781 1688 ntBASIC4.4□□□□□ -1.71
LTBQ06643 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LTBQ06643 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LTBQ06643 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LTBQ06643 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBQ06643 AP000526.1-201ENST00000603308 1388 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC093849.1-201ENST00000563631 2209 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
LTBQ06643 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 SALL4P2-201ENST00000423288 2910 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 NEAT1-202ENST00000501122 22743 ntBASIC4.39□□□□□ -1.71
LTBQ06643 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LTBQ06643 RN7SKP95-201ENST00000362860 303 ntBASIC4.39□□□□□ -1.71
LTBQ06643 RNU6-553P-201ENST00000364047 96 ntBASIC4.39□□□□□ -1.71
LTBQ06643 RNU6-549P-201ENST00000384433 107 ntBASIC4.39□□□□□ -1.71
LTBQ06643 MT-TP-201ENST00000387461 68 ntBASIC4.39□□□□□ -1.71
LTBQ06643 RNU6-244P-201ENST00000391028 104 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AL079342.2-201ENST00000403367 482 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC002524.1-201ENST00000411687 547 ntBASIC4.39□□□□□ -1.71
LTBQ06643 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 AC006960.1-201ENST00000419980 153 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC069213.2-201ENST00000420238 366 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC019178.2-201ENST00000423595 505 ntBASIC4.39□□□□□ -1.71
LTBQ06643 CKS1BP6-201ENST00000424932 240 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 OR52J1P-201ENST00000450596 932 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 AC020890.1-201ENST00000491837 504 ntBASIC4.39□□□□□ -1.71
LTBQ06643 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 MTCO3P7-201ENST00000510008 774 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AF213884.2-201ENST00000510417 903 ntBASIC4.39□□□□□ -1.71
LTBQ06643 BTF3P13-201ENST00000513224 490 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 PRELID3BP4-201ENST00000515476 571 ntBASIC4.39□□□□□ -1.71
LTBQ06643 RN7SKP21-201ENST00000516503 220 ntBASIC4.39□□□□□ -1.71
LTBQ06643 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.39□□□□□ -1.71
LTBQ06643 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.39□□□□□ -1.71
LTBQ06643 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms