Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 AC107027.3-201ENST00000565095 3473 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AL445437.1-201ENST00000623157 3087 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 AC012618.3-205ENST00000637896 1496 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN20P56880 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 SNORD116.1-201ENST00000365628 92 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN20P56880 MIR298-201ENST00000401212 88 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 TMSB4XP8-201ENST00000402089 135 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AL590084.1-201ENST00000407885 387 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN20P56880 TMSB4XP6-201ENST00000415187 135 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 TMSB4XP1-201ENST00000424567 135 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN20P56880 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC079776.3-201ENST00000450665 370 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC079168.2-201ENST00000453977 416 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 USP9YP25-201ENST00000457708 443 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 RPL5P30-201ENST00000465511 891 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC004263.1-201ENST00000479327 332 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 OR51K1P-201ENST00000510214 950 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 OR5M2P-201ENST00000529003 936 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 OR4C2P-201ENST00000530855 1064 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC107918.3-201ENST00000533272 382 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC063949.1-201ENST00000552900 865 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 FKBP1BP1-201ENST00000553366 325 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 MTND6P33-201ENST00000571794 183 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 VN1R78P-201ENST00000597393 564 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC025811.1-201ENST00000604312 472 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 COX6CP4-201ENST00000605798 228 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 MIR7703-201ENST00000620784 77 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC015804.1-201ENST00000622935 435 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AC019226.2-201ENST00000625973 424 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC090017.1-201ENST00000548612 1779 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 AC068254.2-201ENST00000623938 3577 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN20P56880 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 USP9YP4-201ENST00000424401 1745 ntBASIC4.26□□□□□ -1.73
CLDN20P56880 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN20P56880 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN20P56880 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 AL118496.1-201ENST00000440201 1812 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 AC009229.4-201ENST00000623854 1947 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 MIR448-201ENST00000362131 111 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RN7SKP224-201ENST00000364140 325 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN20P56880 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN20P56880 ARL4AP5-201ENST00000404372 599 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 NCSTNP1-201ENST00000406229 144 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 RN7SKP106-201ENST00000410832 272 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RNU6-272P-201ENST00000411028 104 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 AL591848.1-201ENST00000413092 322 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 AC107081.1-201ENST00000414975 361 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 AL590139.1-201ENST00000416267 400 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 PAICSP7-201ENST00000419829 962 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 MTCO1P54-201ENST00000430139 712 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RPS26P40-201ENST00000435209 294 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms