Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 MFSD8-242ENST00000641690 4199 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.66□□□□□ -1.82
GTF2A1P52655 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.66□□□□□ -1.82
GTF2A1P52655 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.65□□□□□ -1.82
GTF2A1P52655 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
GTF2A1P52655 GTF2H2B-203ENST00000508065 1432 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
GTF2A1P52655 RNA5SP235-201ENST00000365411 114 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 RN7SKP235-201ENST00000410662 305 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 AC093578.1-201ENST00000415219 368 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF2A1P52655 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 AL138878.2-201ENST00000440581 1241 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 RPL7P59-201ENST00000447700 943 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC109327.1-201ENST00000471666 403 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 RPL23AP73-201ENST00000492507 471 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC093824.1-201ENST00000508796 343 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 IGLVIV-65-201ENST00000517313 360 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF2A1P52655 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC078899.3-201ENST00000599065 212 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC090425.2-201ENST00000608818 501 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 AP003400.2-201ENST00000624036 666 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC092184.1-201ENST00000625042 715 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GTF2A1P52655 AC131971.1-201ENST00000332881 1482 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.83
GTF2A1P52655 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GTF2A1P52655 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.64□□□□□ -1.83
GTF2A1P52655 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.64□□□□□ -1.83
GTF2A1P52655 AC006065.1-201ENST00000422539 802 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 AC239367.2-201ENST00000447309 705 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 ARPC3P2-201ENST00000457786 533 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 AF213884.1-201ENST00000488102 463 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.64□□□□□ -1.83
GTF2A1P52655 RNA5SP519-201ENST00000516480 119 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.64□□□□□ -1.83
GTF2A1P52655 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.64□□□□□ -1.83
GTF2A1P52655 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.64□□□□□ -1.83
GTF2A1P52655 AC124312.6-202ENST00000623624 418 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 AC084035.1-201ENST00000634543 607 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GTF2A1P52655 DCAF13P1-201ENST00000495256 1330 ntBASIC3.64□□□□□ -1.83
GTF2A1P52655 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GTF2A1P52655 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
GTF2A1P52655 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GTF2A1P52655 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
GTF2A1P52655 OR4K17-201ENST00000315543 1032 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 RNU1-14P-201ENST00000362759 152 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GTF2A1P52655 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
GTF2A1P52655 RNA5SP344-201ENST00000411081 104 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 GOT2P5-201ENST00000433995 546 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 SNORA71B-202ENST00000439232 272 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 U3.44-201ENST00000458938 192 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 OR52A4P-201ENST00000472867 958 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.63□□□□□ -1.83
GTF2A1P52655 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 KRT19P6-201ENST00000510983 209 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 OR8G5-201ENST00000524943 1041 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 AC007536.1-201ENST00000533382 349 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.63□□□□□ -1.83
GTF2A1P52655 AC008147.3-201ENST00000548666 354 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AL157394.1-201ENST00000562983 1224 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 MIR4436B2-201ENST00000581415 91 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 MIR4436B1-201ENST00000583272 91 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.63□□□□□ -1.83
GTF2A1P52655 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GTF2A1P52655 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.63□□□□□ -1.83
GTF2A1P52655 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.63□□□□□ -1.83
GTF2A1P52655 MIR6862-1-201ENST00000613016 70 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 MIR6862-2-201ENST00000614755 70 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AC019080.5-201ENST00000624891 757 ntBASIC3.63□□□□□ -1.83
GTF2A1P52655 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.63□□□□□ -1.83
GTF2A1P52655 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms