Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 COX6CP15-201ENST00000426313 211 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AL117339.2-201ENST00000430475 180 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TM4SF4P48230 PTMAP3-201ENST00000447474 330 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 NDUFA5P7-201ENST00000452914 242 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.29□□□□□ -1.56
TM4SF4P48230 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.29□□□□□ -1.56
TM4SF4P48230 RPL21P71-201ENST00000465598 459 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.29□□□□□ -1.56
TM4SF4P48230 FTH1P24-201ENST00000503502 462 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.29□□□□□ -1.56
TM4SF4P48230 AC093755.1-201ENST00000512950 1023 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AP001189.2-201ENST00000527320 189 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.29□□□□□ -1.56
TM4SF4P48230 TRAV8-5-201ENST00000537369 341 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.29□□□□□ -1.56
TM4SF4P48230 AC022662.1-201ENST00000580252 331 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 MIR4286-201ENST00000580651 93 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AL158163.2-201ENST00000619110 700 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 AL512506.2-201ENST00000624472 458 ntBASIC5.29□□□□□ -1.56
TM4SF4P48230 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TM4SF4P48230 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TM4SF4P48230 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM4SF4P48230 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM4SF4P48230 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.29□□□□□ -1.56
TM4SF4P48230 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TM4SF4P48230 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.29□□□□□ -1.56
TM4SF4P48230 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.29□□□□□ -1.56
TM4SF4P48230 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TM4SF4P48230 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 RNU6-1066P-201ENST00000363573 105 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 Y_RNA.333-201ENST00000365274 102 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 RNA5SP372-201ENST00000390836 115 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AL133264.1-201ENST00000407157 562 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AL139098.1-201ENST00000407291 389 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AL356095.1-201ENST00000417217 199 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 IPMKP1-201ENST00000425988 855 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 MTATP6P17-201ENST00000431030 672 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 USP9YP31-201ENST00000431405 881 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 Z99714.1-201ENST00000450463 807 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 UBA52P3-201ENST00000491303 382 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 BOLA3P3-201ENST00000505182 232 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AC016559.2-201ENST00000510759 359 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AP000889.1-201ENST00000530968 660 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 LRRC34P1-201ENST00000542742 915 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF4P48230 MIR3944-201ENST00000581277 108 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC061975.8-201ENST00000587058 721 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC245036.5-201ENST00000596330 847 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 AC069304.3-201ENST00000603938 1084 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TM4SF4P48230 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TM4SF4P48230 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF4P48230 AC007529.1-201ENST00000418574 2178 ntBASIC5.28□□□□□ -1.56
TM4SF4P48230 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TM4SF4P48230 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF4P48230 MFSD8-242ENST00000641690 4199 ntBASIC5.27□□□□□ -1.57
TM4SF4P48230 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 DCAF13P3-201ENST00000561147 1334 ntBASIC5.27□□□□□ -1.57
TM4SF4P48230 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF4P48230 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TM4SF4P48230 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF4P48230 ERHP2-201ENST00000402323 299 ntBASIC5.27□□□□□ -1.57
TM4SF4P48230 AL031119.1-201ENST00000404707 1879 ntBASIC5.27□□□□□ -1.57
TM4SF4P48230 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF4P48230 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF4P48230 AC233981.1-201ENST00000423224 461 ntBASIC5.27□□□□□ -1.57
TM4SF4P48230 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms