Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5□□□□□ -1.61
CIITAP33076 AC005229.2-201ENST00000456995 399 ntBASIC5□□□□□ -1.61
CIITAP33076 AC004263.1-201ENST00000479327 332 ntBASIC5□□□□□ -1.61
CIITAP33076 AC104687.1-201ENST00000485829 412 ntBASIC5□□□□□ -1.61
CIITAP33076 AC108022.1-201ENST00000493466 478 ntBASIC5□□□□□ -1.61
CIITAP33076 IGLVIV-65-201ENST00000517313 360 ntBASIC5□□□□□ -1.61
CIITAP33076 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5□□□□□ -1.61
CIITAP33076 OR5AK3P-201ENST00000527486 1297 ntBASIC5□□□□□ -1.61
CIITAP33076 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CIITAP33076 AC006518.2-201ENST00000542513 940 ntBASIC5□□□□□ -1.61
CIITAP33076 DUXAP6-201ENST00000553858 601 ntBASIC5□□□□□ -1.61
CIITAP33076 MTND4P33-201ENST00000556706 766 ntBASIC5□□□□□ -1.61
CIITAP33076 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
CIITAP33076 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5□□□□□ -1.61
CIITAP33076 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5□□□□□ -1.61
CIITAP33076 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5□□□□□ -1.61
CIITAP33076 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5□□□□□ -1.61
CIITAP33076 AL138478.1-201ENST00000612252 832 ntBASIC5□□□□□ -1.61
CIITAP33076 uc_338.13-201ENST00000618243 179 ntBASIC5□□□□□ -1.61
CIITAP33076 AC073569.3-201ENST00000619055 682 ntBASIC5□□□□□ -1.61
CIITAP33076 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
CIITAP33076 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5□□□□□ -1.61
CIITAP33076 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CIITAP33076 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5□□□□□ -1.61
CIITAP33076 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5□□□□□ -1.61
CIITAP33076 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5□□□□□ -1.61
CIITAP33076 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AL672167.1-203ENST00000641299 2975 ntBASIC4.99□□□□□ -1.61
CIITAP33076 GTF2H2B-203ENST00000508065 1432 ntBASIC4.99□□□□□ -1.61
CIITAP33076 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.99□□□□□ -1.61
CIITAP33076 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 RNU4-25P-201ENST00000410569 230 ntBASIC4.99□□□□□ -1.61
CIITAP33076 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 FO393419.3-201ENST00000428741 282 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC084290.1-201ENST00000434995 374 ntBASIC4.99□□□□□ -1.61
CIITAP33076 NANOGP2-201ENST00000435391 727 ntBASIC4.99□□□□□ -1.61
CIITAP33076 CBX1P1-201ENST00000440184 427 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC092473.1-201ENST00000441098 221 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AC097499.1-201ENST00000444277 208 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AL050341.1-201ENST00000447743 313 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AL589880.1-201ENST00000448271 287 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AC008837.1-201ENST00000511513 412 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC092593.2-201ENST00000513866 913 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 RNA5SP464-201ENST00000516251 108 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AC104417.1-201ENST00000523974 751 ntBASIC4.99□□□□□ -1.61
CIITAP33076 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 OR4A2P-201ENST00000527276 913 ntBASIC4.99□□□□□ -1.61
CIITAP33076 HIGD1AP5-201ENST00000529959 259 ntBASIC4.99□□□□□ -1.61
CIITAP33076 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.99□□□□□ -1.61
CIITAP33076 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.99□□□□□ -1.61
CIITAP33076 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.99□□□□□ -1.61
CIITAP33076 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.99□□□□□ -1.61
CIITAP33076 AC008088.1-201ENST00000580993 280 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.99□□□□□ -1.61
CIITAP33076 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.99□□□□□ -1.61
CIITAP33076 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 MTND3P19-201ENST00000603825 345 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC113403.1-201ENST00000604910 193 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AL139344.1-201ENST00000605228 195 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC013468.1-201ENST00000608680 598 ntBASIC4.99□□□□□ -1.61
CIITAP33076 AC010975.3-201ENST00000618727 978 ntBASIC4.99□□□□□ -1.61
CIITAP33076 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.99□□□□□ -1.61
CIITAP33076 CASC19-204ENST00000641001 2055 ntBASIC4.99□□□□□ -1.61
CIITAP33076 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 AC027290.2-201ENST00000623210 18662 ntBASIC4.99□□□□□ -1.61
CIITAP33076 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CIITAP33076 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.99□□□□□ -1.61
CIITAP33076 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CIITAP33076 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.99□□□□□ -1.61
CIITAP33076 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.99□□□□□ -1.61
CIITAP33076 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 MIR331-201ENST00000362302 94 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms