Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 NPM1P47-201ENST00000560843 856 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 MIR5187-201ENST00000583479 76 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXA9P31269 PSMA6P4-201ENST00000603247 718 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 AC084757.4-201ENST00000616350 526 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 AC124312.6-202ENST00000623624 418 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 AL034408.1-202ENST00000636088 415 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA9P31269 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA9P31269 AC024560.2-201ENST00000507981 1497 ntBASIC4.1□□□□□ -1.75
HOXA9P31269 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA9P31269 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA9P31269 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA9P31269 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA9P31269 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA9P31269 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
HOXA9P31269 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA9P31269 MTND2P15-201ENST00000418575 892 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AL139247.1-201ENST00000422768 325 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA9P31269 AC069277.2-201ENST00000454211 432 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 RNU6-775P-201ENST00000459318 96 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 RPS26P3-201ENST00000470205 348 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC090543.2-201ENST00000483963 348 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA9P31269 AC004057.1-201ENST00000485827 348 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA9P31269 RNU6-551P-201ENST00000516661 103 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 NPM1P52-201ENST00000518264 846 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 OR5M7P-201ENST00000526140 972 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA9P31269 AC007599.1-201ENST00000568688 1174 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA9P31269 AC073530.2-201ENST00000623987 261 ntBASIC4.09□□□□□ -1.75
HOXA9P31269 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXA9P31269 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA9P31269 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA9P31269 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA9P31269 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA9P31269 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXA9P31269 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.76
HOXA9P31269 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA9P31269 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA9P31269 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
HOXA9P31269 RNA5SP387-201ENST00000364226 106 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 SNORA62.2-201ENST00000364672 152 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 AC007066.1-201ENST00000392902 381 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 AC093578.1-201ENST00000415219 368 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXA9P31269 AL390879.2-203ENST00000426943 1121 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 MARK2P15-201ENST00000432204 2186 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA9P31269 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA9P31269 AP000926.1-201ENST00000479573 241 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA9P31269 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA9P31269 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA9P31269 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA9P31269 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 EIF1AXP2-201ENST00000555940 413 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA9P31269 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 AL049844.2-201ENST00000604280 628 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 AL096803.3-201ENST00000609032 532 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA9P31269 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA9P31269 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA9P31269 AL136964.1-201ENST00000622038 2990 ntBASIC4.08□□□□□ -1.76
HOXA9P31269 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXA9P31269 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA9P31269 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA9P31269 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA9P31269 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 TCEA1P2-201ENST00000420496 906 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA9P31269 ELOCP8-201ENST00000439309 332 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 ELOCP15-201ENST00000442090 332 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA9P31269 AC104306.1-201ENST00000449702 371 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA9P31269 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA9P31269 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA9P31269 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA9P31269 IGKV2D-19-201ENST00000523346 262 ntBASIC4.07□□□□□ -1.76
HOXA9P31269 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms