Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC010653.1-201ENST00000571108 881 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AL162274.2-201ENST00000614406 332 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AC009464.1-201ENST00000615731 469 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A5P29400 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL4A5P29400 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A5P29400 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 AC098824.1-201ENST00000453565 980 ntBASIC4.18□□□□□ -1.74
COL4A5P29400 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A5P29400 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.18□□□□□ -1.74
COL4A5P29400 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A5P29400 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A5P29400 AC091905.1-201ENST00000624400 311 ntBASIC4.18□□□□□ -1.74
COL4A5P29400 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A5P29400 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A5P29400 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A5P29400 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A5P29400 OTUD4P1-201ENST00000237841 3067 ntBASIC4.18□□□□□ -1.74
COL4A5P29400 DDX6P1-205ENST00000441966 1436 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AL158071.1-201ENST00000430315 461 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AC096638.2-201ENST00000434965 711 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AC099563.1-201ENST00000456086 418 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 RPL27AP5-201ENST00000469428 449 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AC021678.1-201ENST00000505195 936 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AC113192.3-201ENST00000529152 742 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 AC119674.1-212ENST00000641155 993 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 AC119744.1-201ENST00000454746 1715 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 HSPA8P19-201ENST00000505359 1517 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A5P29400 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
COL4A5P29400 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
COL4A5P29400 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
COL4A5P29400 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A5P29400 NACA3P-201ENST00000359690 648 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 RN7SKP74-201ENST00000362849 309 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 U3.39-201ENST00000408569 239 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A5P29400 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A5P29400 MTND6P32-201ENST00000457611 483 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AC084357.1-201ENST00000473404 255 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 RNU6-579P-201ENST00000516879 102 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AC092868.3-201ENST00000560515 784 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A5P29400 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A5P29400 DDX18P4-201ENST00000511690 1966 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AL024507.1-201ENST00000412741 274 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL4A5P29400 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A5P29400 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A5P29400 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A5P29400 AP006245.1-201ENST00000522549 120 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A5P29400 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A5P29400 OR7A8P-201ENST00000595427 913 ntBASIC4.16□□□□□ -1.74
COL4A5P29400 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A5P29400 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A5P29400 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.15□□□□□ -1.74
COL4A5P29400 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
COL4A5P29400 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.15□□□□□ -1.74
COL4A5P29400 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A5P29400 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.15□□□□□ -1.74
COL4A5P29400 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
COL4A5P29400 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A5P29400 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A5P29400 RNA5SP52-201ENST00000362448 134 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 RNA5SP42-201ENST00000364278 115 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 RNA5SP146-201ENST00000410743 123 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A5P29400 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A5P29400 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 NPM1P48-201ENST00000436002 853 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 RPL21P8-201ENST00000465083 535 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 STMN1P2-201ENST00000508435 439 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 FCF1P8-201ENST00000510322 597 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 RNU6-513P-201ENST00000516104 104 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.15□□□□□ -1.75
COL4A5P29400 AL121594.4-201ENST00000556211 1196 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 AC006539.2-201ENST00000601729 572 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 AL669942.2-201ENST00000620352 697 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A5P29400 MFSD8-233ENST00000641482 4860 ntBASIC4.15□□□□□ -1.75
COL4A5P29400 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
COL4A5P29400 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
COL4A5P29400 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms