Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.42□□□□□ -1.38
LIG1P18858 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 AC063977.5-201ENST00000601044 974 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL022394.1-201ENST00000606979 292 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL139124.1-201ENST00000609123 421 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AC103710.1-201ENST00000610003 901 ntBASIC6.42□□□□□ -1.38
LIG1P18858 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 AC136475.10-201ENST00000620253 385 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AC120349.2-201ENST00000625002 298 ntBASIC6.42□□□□□ -1.38
LIG1P18858 CRYM-AS1-204ENST00000637983 556 ntBASIC6.42□□□□□ -1.38
LIG1P18858 PWAR1-201ENST00000624188 2414 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG1P18858 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 AL121950.1-201ENST00000624993 2077 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AL360270.2-201ENST00000562952 5985 ntBASIC6.41□□□□□ -1.38
LIG1P18858 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 ABCC13-202ENST00000463099 3842 ntBASIC6.41□□□□□ -1.38
LIG1P18858 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 AL034370.1-201ENST00000397254 1590 ntBASIC6.41□□□□□ -1.38
LIG1P18858 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.41□□□□□ -1.38
LIG1P18858 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 GVINP1-202ENST00000531871 7271 ntBASIC6.41□□□□□ -1.38
LIG1P18858 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIG1P18858 MTCO3P40-201ENST00000392516 676 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AL512422.1-201ENST00000407033 553 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RPSAP35-201ENST00000413753 818 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG1P18858 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG1P18858 HMGB3P24-201ENST00000433260 622 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RPL23AP19-201ENST00000436229 369 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RPS4XP4-201ENST00000443195 763 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 AC016724.1-201ENST00000453215 421 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC010307.1-201ENST00000467206 836 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC112206.1-201ENST00000468416 477 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC013828.1-201ENST00000481845 158 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 RPL7L1P13-201ENST00000511702 739 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RNY4P37-201ENST00000516225 96 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RNA5SP135-201ENST00000517019 125 ntBASIC6.41□□□□□ -1.38
LIG1P18858 RNU6-430P-201ENST00000517078 107 ntBASIC6.41□□□□□ -1.38
LIG1P18858 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 AP001189.2-201ENST00000527320 189 ntBASIC6.41□□□□□ -1.38
LIG1P18858 HMGN2P36-201ENST00000529541 409 ntBASIC6.41□□□□□ -1.38
LIG1P18858 OR4A45P-201ENST00000529954 901 ntBASIC6.41□□□□□ -1.38
LIG1P18858 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.41□□□□□ -1.38
LIG1P18858 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG1P18858 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 SS18L2P2-201ENST00000583960 235 ntBASIC6.41□□□□□ -1.38
LIG1P18858 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.41□□□□□ -1.38
LIG1P18858 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC108479.2-201ENST00000617314 601 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AC009033.1-201ENST00000624279 431 ntBASIC6.41□□□□□ -1.38
LIG1P18858 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 AC005005.4-201ENST00000623789 16698 ntBASIC6.41□□□□□ -1.38
LIG1P18858 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 AC117529.2-201ENST00000512159 2068 ntBASIC6.41□□□□□ -1.38
LIG1P18858 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 DCAF13P1-201ENST00000495256 1330 ntBASIC6.41□□□□□ -1.38
LIG1P18858 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIG1P18858 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG1P18858 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG1P18858 CDR1-202ENST00000625883 1485 ntBASIC6.41□□□□□ -1.38
LIG1P18858 MAPK10-328ENST00000641553 4009 ntBASIC6.41□□□□□ -1.38
LIG1P18858 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.4□□□□□ -1.38
LIG1P18858 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.4□□□□□ -1.38
LIG1P18858 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
LIG1P18858 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
LIG1P18858 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.4□□□□□ -1.38
LIG1P18858 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 OR4K15-201ENST00000305051 1216 ntBASIC6.4□□□□□ -1.38
LIG1P18858 GAPDHP24-201ENST00000328713 983 ntBASIC6.4□□□□□ -1.38
LIG1P18858 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LIG1P18858 Y_RNA.296-201ENST00000364930 108 ntBASIC6.4□□□□□ -1.38
LIG1P18858 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LIG1P18858 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIG1P18858 RNU6-723P-201ENST00000383973 107 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms