Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.57□□□□□ -1.68
PCNAP12004 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
PCNAP12004 MIR4666A-201ENST00000580160 79 ntBASIC4.57□□□□□ -1.68
PCNAP12004 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.57□□□□□ -1.68
PCNAP12004 PCNAP1-202ENST00000595299 752 ntBASIC4.57□□□□□ -1.68
PCNAP12004 AC068790.7-201ENST00000602347 528 ntBASIC4.57□□□□□ -1.68
PCNAP12004 AL355816.1-201ENST00000607951 118 ntBASIC4.57□□□□□ -1.68
PCNAP12004 AC099676.1-201ENST00000608886 657 ntBASIC4.57□□□□□ -1.68
PCNAP12004 uc_338.18-201ENST00000615451 175 ntBASIC4.57□□□□□ -1.68
PCNAP12004 AC068870.2-201ENST00000620635 389 ntBASIC4.57□□□□□ -1.68
PCNAP12004 CR392039.4-201ENST00000624968 501 ntBASIC4.57□□□□□ -1.68
PCNAP12004 AC046144.1-201ENST00000478559 1853 ntBASIC4.57□□□□□ -1.68
PCNAP12004 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCNAP12004 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCNAP12004 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.57□□□□□ -1.68
PCNAP12004 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
PCNAP12004 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCNAP12004 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.56□□□□□ -1.68
PCNAP12004 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 RNA5SP191-201ENST00000362585 102 ntBASIC4.56□□□□□ -1.68
PCNAP12004 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 AL645927.1-201ENST00000396783 406 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AL645733.1-201ENST00000402250 217 ntBASIC4.56□□□□□ -1.68
PCNAP12004 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AC009237.10-201ENST00000414112 510 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 MTCO1P3-201ENST00000429327 192 ntBASIC4.56□□□□□ -1.68
PCNAP12004 RPS27P18-201ENST00000431701 247 ntBASIC4.56□□□□□ -1.68
PCNAP12004 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.56□□□□□ -1.68
PCNAP12004 Z77249.1-201ENST00000444622 1175 ntBASIC4.56□□□□□ -1.68
PCNAP12004 VN1R40P-201ENST00000455196 941 ntBASIC4.56□□□□□ -1.68
PCNAP12004 NECAP1P2-201ENST00000455668 727 ntBASIC4.56□□□□□ -1.68
PCNAP12004 RPL37P3-201ENST00000456825 293 ntBASIC4.56□□□□□ -1.68
PCNAP12004 SCARNA10-201ENST00000459255 330 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AC063943.1-201ENST00000465434 453 ntBASIC4.56□□□□□ -1.68
PCNAP12004 DYNLL1P6-201ENST00000503440 264 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AC008638.1-201ENST00000506035 866 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.56□□□□□ -1.68
PCNAP12004 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 MTND2P38-201ENST00000522536 667 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.56□□□□□ -1.68
PCNAP12004 AC004217.3-201ENST00000551552 878 ntBASIC4.56□□□□□ -1.68
PCNAP12004 EDDM3DP-201ENST00000554692 434 ntBASIC4.56□□□□□ -1.68
PCNAP12004 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AC016180.1-201ENST00000567945 403 ntBASIC4.56□□□□□ -1.68
PCNAP12004 MIR4646-201ENST00000580775 63 ntBASIC4.56□□□□□ -1.68
PCNAP12004 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.56□□□□□ -1.68
PCNAP12004 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
PCNAP12004 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AC008751.2-201ENST00000597885 980 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AC013244.1-201ENST00000604279 193 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AP003392.5-201ENST00000607857 415 ntBASIC4.56□□□□□ -1.68
PCNAP12004 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.56□□□□□ -1.68
PCNAP12004 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 AL442639.1-201ENST00000625030 1899 ntBASIC4.56□□□□□ -1.68
PCNAP12004 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCNAP12004 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PCNAP12004 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCNAP12004 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCNAP12004 AC134882.1-201ENST00000603738 1676 ntBASIC4.55□□□□□ -1.68
PCNAP12004 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCNAP12004 MIR105-2-201ENST00000385083 81 ntBASIC4.55□□□□□ -1.68
PCNAP12004 ARL4AP5-201ENST00000404372 599 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 HMGB1P49-201ENST00000418882 569 ntBASIC4.55□□□□□ -1.68
PCNAP12004 EIF4EP1-201ENST00000422311 642 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.55□□□□□ -1.68
PCNAP12004 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 PSMD10P3-201ENST00000437000 448 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 RAB11AP1-201ENST00000442978 646 ntBASIC4.55□□□□□ -1.68
PCNAP12004 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 AL645939.1-201ENST00000453429 797 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC079168.2-201ENST00000453977 416 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 AC005008.1-201ENST00000456151 612 ntBASIC4.55□□□□□ -1.68
PCNAP12004 RPS5P7-201ENST00000456664 608 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC006511.1-201ENST00000470614 315 ntBASIC4.55□□□□□ -1.68
PCNAP12004 RPL7P16-201ENST00000479738 738 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC011352.3-201ENST00000505162 593 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms