Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.33□□□□□ -1.4
RARAP10276 RNU5E-1-201ENST00000362477 120 ntBASIC6.33□□□□□ -1.4
RARAP10276 RNU105B-201ENST00000364478 208 ntBASIC6.33□□□□□ -1.4
RARAP10276 SNORA32.2-201ENST00000384049 122 ntBASIC6.33□□□□□ -1.4
RARAP10276 MIR559-201ENST00000385188 96 ntBASIC6.33□□□□□ -1.4
RARAP10276 MIR323B-201ENST00000385269 82 ntBASIC6.33□□□□□ -1.4
RARAP10276 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RARAP10276 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RARAP10276 AL356967.1-201ENST00000406305 431 ntBASIC6.33□□□□□ -1.4
RARAP10276 RNA5SP156-201ENST00000410250 110 ntBASIC6.33□□□□□ -1.4
RARAP10276 AL096829.1-201ENST00000413677 457 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.33□□□□□ -1.4
RARAP10276 SLC35E1P1-201ENST00000419313 864 ntBASIC6.33□□□□□ -1.4
RARAP10276 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.33□□□□□ -1.4
RARAP10276 SETP9-201ENST00000423837 832 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 IFNA20P-201ENST00000436840 528 ntBASIC6.33□□□□□ -1.4
RARAP10276 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 RPS23P9-201ENST00000448848 438 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC002075.1-201ENST00000457396 676 ntBASIC6.33□□□□□ -1.4
RARAP10276 SNORD19B-201ENST00000459623 84 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC098818.1-201ENST00000478593 252 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC005017.1-201ENST00000482002 490 ntBASIC6.33□□□□□ -1.4
RARAP10276 CR383656.1-201ENST00000484916 377 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 RPS27P20-201ENST00000492051 246 ntBASIC6.33□□□□□ -1.4
RARAP10276 RPSAP51-201ENST00000497462 645 ntBASIC6.33□□□□□ -1.4
RARAP10276 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 Y_RNA.691-201ENST00000516611 103 ntBASIC6.33□□□□□ -1.4
RARAP10276 SNORD60.2-201ENST00000516883 86 ntBASIC6.33□□□□□ -1.4
RARAP10276 BTF3P12-201ENST00000519620 469 ntBASIC6.33□□□□□ -1.4
RARAP10276 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.33□□□□□ -1.4
RARAP10276 PDCD5P1-201ENST00000543528 309 ntBASIC6.33□□□□□ -1.4
RARAP10276 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.33□□□□□ -1.4
RARAP10276 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.33□□□□□ -1.4
RARAP10276 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 MIR3167-201ENST00000579623 85 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.33□□□□□ -1.4
RARAP10276 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 AC010525.2-201ENST00000590920 195 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC006116.10-201ENST00000591836 581 ntBASIC6.33□□□□□ -1.4
RARAP10276 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 AC025857.2-201ENST00000602711 238 ntBASIC6.33□□□□□ -1.4
RARAP10276 SMIM12P1-201ENST00000603004 274 ntBASIC6.33□□□□□ -1.4
RARAP10276 AC011468.4-201ENST00000603942 409 ntBASIC6.33□□□□□ -1.4
RARAP10276 AL136097.3-201ENST00000611097 505 ntBASIC6.33□□□□□ -1.4
RARAP10276 uc_338.29-201ENST00000615099 168 ntBASIC6.33□□□□□ -1.4
RARAP10276 AL356585.4-201ENST00000623078 1229 ntBASIC6.33□□□□□ -1.4
RARAP10276 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RARAP10276 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RARAP10276 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RARAP10276 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
RARAP10276 AL161756.3-201ENST00000641216 2071 ntBASIC6.32□□□□□ -1.4
RARAP10276 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RARAP10276 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 SNORA21-201ENST00000362423 132 ntBASIC6.32□□□□□ -1.4
RARAP10276 Y_RNA.145-201ENST00000363527 102 ntBASIC6.32□□□□□ -1.4
RARAP10276 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 GAPDHP42-201ENST00000406848 981 ntBASIC6.32□□□□□ -1.4
RARAP10276 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.32□□□□□ -1.4
RARAP10276 THEM7P-201ENST00000419556 672 ntBASIC6.32□□□□□ -1.4
RARAP10276 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 RPL7AP14-201ENST00000424041 802 ntBASIC6.32□□□□□ -1.4
RARAP10276 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.32□□□□□ -1.4
RARAP10276 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.32□□□□□ -1.4
RARAP10276 BNIP3P2-201ENST00000441221 577 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC007383.1-201ENST00000445875 636 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.32□□□□□ -1.4
RARAP10276 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.32□□□□□ -1.4
RARAP10276 RPS15AP17-201ENST00000470598 390 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.32□□□□□ -1.4
RARAP10276 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.32□□□□□ -1.4
RARAP10276 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.32□□□□□ -1.4
RARAP10276 AC109481.1-201ENST00000509173 282 ntBASIC6.32□□□□□ -1.4
RARAP10276 SCOCP1-201ENST00000554676 349 ntBASIC6.32□□□□□ -1.4
RARAP10276 AC079075.1-201ENST00000559543 878 ntBASIC6.32□□□□□ -1.4
RARAP10276 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms