Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNA5SP296-201ENST00000410523 111 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 APOOP2-201ENST00000461561 539 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.27□□□□□ -1.89
FREM3P0C091 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.27□□□□□ -1.89
FREM3P0C091 AC141257.3-201ENST00000572906 215 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.27□□□□□ -1.89
FREM3P0C091 MIR5186-201ENST00000577504 120 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.27□□□□□ -1.89
FREM3P0C091 SRGNP1-201ENST00000603392 451 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 AC015908.5-201ENST00000623289 343 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.27□□□□□ -1.89
FREM3P0C091 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.27□□□□□ -1.89
FREM3P0C091 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
FREM3P0C091 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.27□□□□□ -1.89
FREM3P0C091 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.27□□□□□ -1.89
FREM3P0C091 AC007656.2-201ENST00000624902 4547 ntBASIC3.27□□□□□ -1.89
FREM3P0C091 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
FREM3P0C091 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.26□□□□□ -1.89
FREM3P0C091 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
FREM3P0C091 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 OR6K3-202ENST00000368146 996 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 MIR7-3-201ENST00000384898 110 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
FREM3P0C091 RNU2-65P-201ENST00000410162 185 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 HSFY4P-201ENST00000415994 1181 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 SYF2P2-201ENST00000417620 583 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AP000907.1-201ENST00000428428 510 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.26□□□□□ -1.89
FREM3P0C091 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 AC007458.1-201ENST00000542812 373 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AL354976.1-201ENST00000613843 387 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 U6.105-201ENST00000637379 88 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AL161912.2-201ENST00000565707 3007 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
FREM3P0C091 SNORA68.2-201ENST00000391263 128 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 RPL7P28-201ENST00000437739 740 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 HMGB3P9-201ENST00000441799 583 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.26□□□□□ -1.89
FREM3P0C091 RN7SL293P-201ENST00000481765 281 ntBASIC3.26□□□□□ -1.89
FREM3P0C091 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.26□□□□□ -1.89
FREM3P0C091 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.26□□□□□ -1.89
FREM3P0C091 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.26□□□□□ -1.89
FREM3P0C091 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.26□□□□□ -1.89
FREM3P0C091 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FREM3P0C091 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.25□□□□□ -1.89
FREM3P0C091 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 HMGN2P8-201ENST00000391458 268 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 HIGD1AP12-201ENST00000427832 281 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 ATP5JP1-201ENST00000431631 322 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 AC010655.1-201ENST00000449336 292 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 MTCO3P16-201ENST00000454456 754 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 AC007688.1-201ENST00000475592 759 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 RN7SKP157-201ENST00000516174 282 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 RN7SKP209-201ENST00000516888 304 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC008489.1-201ENST00000524271 483 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.25□□□□□ -1.89
FREM3P0C091 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.25□□□□□ -1.89
FREM3P0C091 RN7SL339P-201ENST00000580597 296 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 Z82195.1-201ENST00000604558 398 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AL158196.1-201ENST00000616786 434 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FREM3P0C091 AC074029.4-201ENST00000624796 1859 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.25□□□□□ -1.89
FREM3P0C091 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.25□□□□□ -1.89
FREM3P0C091 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 RN7SKP177-201ENST00000410567 355 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC009263.1-201ENST00000441193 1239 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.25□□□□□ -1.89
FREM3P0C091 OR4A2P-201ENST00000527276 913 ntBASIC3.25□□□□□ -1.89
FREM3P0C091 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms