Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.96□□□□□ -1.78
MT-ND1P03886 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.96□□□□□ -1.78
MT-ND1P03886 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.96□□□□□ -1.78
MT-ND1P03886 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.96□□□□□ -1.78
MT-ND1P03886 MIR4480-201ENST00000582492 71 ntBASIC3.96□□□□□ -1.78
MT-ND1P03886 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 NTAN1P1-201ENST00000603150 646 ntBASIC3.96□□□□□ -1.78
MT-ND1P03886 AC008782.1-201ENST00000603386 430 ntBASIC3.96□□□□□ -1.78
MT-ND1P03886 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MT-ND1P03886 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MT-ND1P03886 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.96□□□□□ -1.78
MT-ND1P03886 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.78
MT-ND1P03886 DHX40P1-201ENST00000588725 1412 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 EIF2AP4-201ENST00000424793 1781 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.95□□□□□ -1.78
MT-ND1P03886 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 RNA5SP391-201ENST00000363456 119 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 RNU6-925P-201ENST00000384629 104 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AL035419.1-201ENST00000397037 564 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 ZNF603P-201ENST00000405613 487 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC013262.1-201ENST00000426710 252 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 NPM1P34-201ENST00000428821 893 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 ELOCP6-201ENST00000429066 328 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.95□□□□□ -1.78
MT-ND1P03886 DHFRP3-201ENST00000455595 559 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 ELOCP12-201ENST00000458706 328 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC008379.1-201ENST00000463655 464 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 RPL21P18-201ENST00000469899 480 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.95□□□□□ -1.78
MT-ND1P03886 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.95□□□□□ -1.78
MT-ND1P03886 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.95□□□□□ -1.78
MT-ND1P03886 RN7SKP283-201ENST00000517197 270 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.95□□□□□ -1.78
MT-ND1P03886 PTP4A1P6-201ENST00000531034 478 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AC007599.1-201ENST00000568688 1174 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC126365.2-201ENST00000580630 379 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AC008536.1-201ENST00000602872 669 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AP003117.2-201ENST00000606010 545 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC021851.1-201ENST00000608537 1082 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AL049539.1-201ENST00000611964 459 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 VN1R9P-201ENST00000614184 867 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 MIR6780A-201ENST00000615089 68 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
MT-ND1P03886 AC008013.2-202ENST00000637965 364 ntBASIC3.95□□□□□ -1.78
MT-ND1P03886 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MT-ND1P03886 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
MT-ND1P03886 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.95□□□□□ -1.78
MT-ND1P03886 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
MT-ND1P03886 PNPT1P2-201ENST00000456768 2050 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
MT-ND1P03886 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AL133412.1-201ENST00000380194 2992 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.94□□□□□ -1.78
MT-ND1P03886 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MT-ND1P03886 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MT-ND1P03886 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.94□□□□□ -1.78
MT-ND1P03886 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 RNU6-1000P-201ENST00000391066 106 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.94□□□□□ -1.78
MT-ND1P03886 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 EIF1P3-201ENST00000423841 334 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 AC008065.1-201ENST00000428525 348 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 AC005189.1-201ENST00000431286 310 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 MTCO1P43-201ENST00000431831 488 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.94□□□□□ -1.78
MT-ND1P03886 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.94□□□□□ -1.78
MT-ND1P03886 CYCSP42-201ENST00000450823 238 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.94□□□□□ -1.78
MT-ND1P03886 AL513533.1-201ENST00000453728 415 ntBASIC3.94□□□□□ -1.78
MT-ND1P03886 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms