Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 OR5AC4P-202ENST00000642086 985 ntBASIC4.02□□□□□ -1.77
APOEP02649 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
APOEP02649 AC009313.2-201ENST00000417893 1941 ntBASIC4.01□□□□□ -1.77
APOEP02649 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
APOEP02649 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 AC114546.3-201ENST00000623582 1734 ntBASIC4.01□□□□□ -1.77
APOEP02649 TNPO1P3-201ENST00000436471 2662 ntBASIC4.01□□□□□ -1.77
APOEP02649 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 AP004289.2-201ENST00000444413 1457 ntBASIC4.01□□□□□ -1.77
APOEP02649 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
APOEP02649 SNORA3.3-201ENST00000408712 125 ntBASIC4.01□□□□□ -1.77
APOEP02649 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 KCTD10P1-201ENST00000434203 625 ntBASIC4.01□□□□□ -1.77
APOEP02649 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.01□□□□□ -1.77
APOEP02649 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.01□□□□□ -1.77
APOEP02649 RPS17P13-201ENST00000448974 407 ntBASIC4.01□□□□□ -1.77
APOEP02649 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
APOEP02649 RPL7L1P8-201ENST00000469911 741 ntBASIC4.01□□□□□ -1.77
APOEP02649 AC020898.1-201ENST00000474167 787 ntBASIC4.01□□□□□ -1.77
APOEP02649 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.01□□□□□ -1.77
APOEP02649 RN7SKP141-201ENST00000516167 338 ntBASIC4.01□□□□□ -1.77
APOEP02649 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
APOEP02649 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.01□□□□□ -1.77
APOEP02649 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.01□□□□□ -1.77
APOEP02649 AC084757.1-201ENST00000559987 490 ntBASIC4.01□□□□□ -1.77
APOEP02649 HSPE1P5-201ENST00000561489 272 ntBASIC4.01□□□□□ -1.77
APOEP02649 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.01□□□□□ -1.77
APOEP02649 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.01□□□□□ -1.77
APOEP02649 AC123786.2-201ENST00000603459 275 ntBASIC4.01□□□□□ -1.77
APOEP02649 AC000123.2-201ENST00000623124 461 ntBASIC4.01□□□□□ -1.77
APOEP02649 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 AL136964.1-201ENST00000622038 2990 ntBASIC4.01□□□□□ -1.77
APOEP02649 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.01□□□□□ -1.77
APOEP02649 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOEP02649 AC010329.2-201ENST00000595195 2737 ntBASIC4.01□□□□□ -1.77
APOEP02649 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4□□□□□ -1.77
APOEP02649 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
APOEP02649 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
APOEP02649 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4□□□□□ -1.77
APOEP02649 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4□□□□□ -1.77
APOEP02649 MIR30B-201ENST00000384850 88 ntBASIC4□□□□□ -1.77
APOEP02649 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4□□□□□ -1.77
APOEP02649 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4□□□□□ -1.77
APOEP02649 SEPT7P6-201ENST00000469999 1143 ntBASIC4□□□□□ -1.77
APOEP02649 AC087385.1-201ENST00000475062 312 ntBASIC4□□□□□ -1.77
APOEP02649 RPL7P47-201ENST00000497299 556 ntBASIC4□□□□□ -1.77
APOEP02649 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4□□□□□ -1.77
APOEP02649 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4□□□□□ -1.77
APOEP02649 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4□□□□□ -1.77
APOEP02649 AC010200.2-201ENST00000605098 235 ntBASIC4□□□□□ -1.77
APOEP02649 AL354760.1-201ENST00000608357 643 ntBASIC4□□□□□ -1.77
APOEP02649 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4□□□□□ -1.77
APOEP02649 AC016252.1-201ENST00000609721 474 ntBASIC4□□□□□ -1.77
APOEP02649 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
APOEP02649 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4□□□□□ -1.77
APOEP02649 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
APOEP02649 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
APOEP02649 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
APOEP02649 NCAPGP1-201ENST00000505112 1814 ntBASIC4□□□□□ -1.77
APOEP02649 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4□□□□□ -1.77
APOEP02649 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
APOEP02649 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 RPS4XP5-202ENST00000449995 1334 ntBASIC3.99□□□□□ -1.77
APOEP02649 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 OR4A15-201ENST00000314706 1035 ntBASIC3.99□□□□□ -1.77
APOEP02649 RNU4-7P-201ENST00000364758 141 ntBASIC3.99□□□□□ -1.77
APOEP02649 RPL32P23-201ENST00000397237 405 ntBASIC3.99□□□□□ -1.77
APOEP02649 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.99□□□□□ -1.77
APOEP02649 RNU6-603P-201ENST00000411403 107 ntBASIC3.99□□□□□ -1.77
APOEP02649 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.99□□□□□ -1.77
APOEP02649 AC010740.1-201ENST00000417035 684 ntBASIC3.99□□□□□ -1.77
APOEP02649 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
APOEP02649 IFNNP1-201ENST00000429219 553 ntBASIC3.99□□□□□ -1.77
APOEP02649 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.99□□□□□ -1.77
APOEP02649 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
APOEP02649 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.99□□□□□ -1.77
APOEP02649 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
APOEP02649 RNU6-352P-201ENST00000516908 107 ntBASIC3.99□□□□□ -1.77
APOEP02649 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.99□□□□□ -1.77
APOEP02649 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 AC022695.1-201ENST00000522089 237 ntBASIC3.99□□□□□ -1.77
APOEP02649 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.99□□□□□ -1.77
APOEP02649 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.99□□□□□ -1.77
APOEP02649 AC107982.3-201ENST00000584957 985 ntBASIC3.99□□□□□ -1.77
APOEP02649 EIF1P6-201ENST00000600054 334 ntBASIC3.99□□□□□ -1.77
APOEP02649 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.99□□□□□ -1.77
APOEP02649 AC009452.1-201ENST00000640823 606 ntBASIC3.99□□□□□ -1.77
APOEP02649 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
APOEP02649 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms