Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CUX2O14529 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUX2O14529 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CUX2O14529 GSTA8P-201ENST00000404253 637 ntBASIC6.36□□□□□ -1.39
CUX2O14529 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.36□□□□□ -1.39
CUX2O14529 RPL7AP73-201ENST00000413490 353 ntBASIC6.36□□□□□ -1.39
CUX2O14529 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.36□□□□□ -1.39
CUX2O14529 RPS15AP29-201ENST00000445539 400 ntBASIC6.36□□□□□ -1.39
CUX2O14529 AC022795.1-201ENST00000473808 480 ntBASIC6.36□□□□□ -1.39
CUX2O14529 AC233702.9-201ENST00000581528 203 ntBASIC6.36□□□□□ -1.39
CUX2O14529 AC103881.1-201ENST00000603476 538 ntBASIC6.36□□□□□ -1.39
CUX2O14529 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUX2O14529 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUX2O14529 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.36□□□□□ -1.39
CUX2O14529 AC018529.3-201ENST00000624212 2254 ntBASIC6.36□□□□□ -1.39
CUX2O14529 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CUX2O14529 RPL7P24-201ENST00000493052 752 ntBASIC6.35□□□□□ -1.39
CUX2O14529 MIR7851-201ENST00000610611 160 ntBASIC6.35□□□□□ -1.39
CUX2O14529 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.35□□□□□ -1.39
CUX2O14529 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC6.35□□□□□ -1.39
CUX2O14529 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 MAPK10-253ENST00000641010 4072 ntBASIC6.35□□□□□ -1.39
CUX2O14529 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC6.35□□□□□ -1.39
CUX2O14529 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CUX2O14529 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CUX2O14529 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.34□□□□□ -1.39
CUX2O14529 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.34□□□□□ -1.39
CUX2O14529 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 AC006445.1-201ENST00000491925 405 ntBASIC6.34□□□□□ -1.39
CUX2O14529 SNORA70.18-201ENST00000516696 98 ntBASIC6.34□□□□□ -1.39
CUX2O14529 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.34□□□□□ -1.39
CUX2O14529 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.34□□□□□ -1.39
CUX2O14529 AC016839.1-201ENST00000578162 867 ntBASIC6.34□□□□□ -1.39
CUX2O14529 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.34□□□□□ -1.39
CUX2O14529 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUX2O14529 AL445529.1-201ENST00000398713 389 ntBASIC6.34□□□□□ -1.4
CUX2O14529 GSTM3P2-201ENST00000412746 530 ntBASIC6.34□□□□□ -1.4
CUX2O14529 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC6.34□□□□□ -1.4
CUX2O14529 BX890604.2-201ENST00000427883 474 ntBASIC6.34□□□□□ -1.4
CUX2O14529 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.34□□□□□ -1.4
CUX2O14529 FTH1P1-201ENST00000437933 532 ntBASIC6.34□□□□□ -1.4
CUX2O14529 VN1R25P-201ENST00000443385 738 ntBASIC6.34□□□□□ -1.4
CUX2O14529 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.34□□□□□ -1.4
CUX2O14529 AL132656.3-201ENST00000606384 1595 ntBASIC6.33□□□□□ -1.4
CUX2O14529 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUX2O14529 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.33□□□□□ -1.4
CUX2O14529 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CUX2O14529 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUX2O14529 OR1AA1P-201ENST00000419597 916 ntBASIC6.33□□□□□ -1.4
CUX2O14529 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.33□□□□□ -1.4
CUX2O14529 RAB28P3-201ENST00000448325 597 ntBASIC6.33□□□□□ -1.4
CUX2O14529 TCP11X3P-202ENST00000514289 1254 ntBASIC6.33□□□□□ -1.4
CUX2O14529 OR5M7P-201ENST00000526140 972 ntBASIC6.33□□□□□ -1.4
CUX2O14529 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.33□□□□□ -1.4
CUX2O14529 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.33□□□□□ -1.4
CUX2O14529 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.33□□□□□ -1.4
CUX2O14529 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC6.33□□□□□ -1.4
CUX2O14529 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.33□□□□□ -1.4
CUX2O14529 MFSD8-236ENST00000641509 4050 ntBASIC6.33□□□□□ -1.4
CUX2O14529 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUX2O14529 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CUX2O14529 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CUX2O14529 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.32□□□□□ -1.4
CUX2O14529 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CUX2O14529 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CUX2O14529 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.32□□□□□ -1.4
CUX2O14529 AF228730.2-201ENST00000438784 848 ntBASIC6.32□□□□□ -1.4
CUX2O14529 HMGB1P37-201ENST00000439613 609 ntBASIC6.32□□□□□ -1.4
CUX2O14529 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC6.32□□□□□ -1.4
CUX2O14529 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC6.32□□□□□ -1.4
CUX2O14529 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.32□□□□□ -1.4
CUX2O14529 RAC1P2-201ENST00000511164 579 ntBASIC6.32□□□□□ -1.4
CUX2O14529 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.32□□□□□ -1.4
CUX2O14529 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.32□□□□□ -1.4
CUX2O14529 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.32□□□□□ -1.4
CUX2O14529 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.32□□□□□ -1.4
CUX2O14529 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.32□□□□□ -1.4
CUX2O14529 SNORA62.6-201ENST00000606322 83 ntBASIC6.32□□□□□ -1.4
CUX2O14529 AL139089.1-201ENST00000620372 975 ntBASIC6.32□□□□□ -1.4
CUX2O14529 AC095038.2-201ENST00000621464 1070 ntBASIC6.32□□□□□ -1.4
CUX2O14529 OR51C1P-202ENST00000641159 1444 ntBASIC6.32□□□□□ -1.4
CUX2O14529 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CUX2O14529 AC008079.2-201ENST00000623543 20396 ntBASIC6.32□□□□□ -1.4
CUX2O14529 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms