Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 MIR4436B1-201ENST00000583272 91 ntBASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 MIR4506-201ENST00000584693 77 ntBASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 RNU1-30P-201ENST00000606575 163 ntBASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 AL121890.3-201ENST00000618494 516 ntBASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.56□□□□□ -2
SMIM27A0A1W2PRY6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC119751.6-201ENST00000416712 186 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 RPS27AP7-201ENST00000422792 455 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL627308.1-201ENST00000435693 821 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 Z99127.3-201ENST00000448158 395 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL162151.2-201ENST00000448875 158 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 RPL23AP12-201ENST00000467573 473 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 ST13P14-201ENST00000474095 734 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AP001207.2-201ENST00000519490 539 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 OR5D17P-201ENST00000531492 978 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC090888.3-201ENST00000558917 509 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC055876.1-202ENST00000567053 138 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC012531.5-201ENST00000611375 151 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL354976.1-201ENST00000613843 387 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 MIR7155-201ENST00000615925 56 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AC069209.1-201ENST00000619282 651 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 AL136964.1-201ENST00000622038 2990 ntBASIC2.55□□□□□ -2
SMIM27A0A1W2PRY6 XPOTP1-201ENST00000443317 2398 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 BX005019.1-201ENST00000561881 1810 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC011503.2-201ENST00000594230 1500 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 SNORA46-201ENST00000384762 135 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RSL24D1P1-201ENST00000404972 493 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RN7SKP123-201ENST00000410732 291 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RN7SKP58-201ENST00000411010 305 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 Z99755.1-201ENST00000414048 380 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 BMS1P22-201ENST00000414726 313 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC023141.6-201ENST00000429418 337 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RPL23AP69-201ENST00000431134 458 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 OR2B8P-201ENST00000432841 938 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 UQCRHP3-201ENST00000451503 251 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RPL10P17-201ENST00000453852 316 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RN7SL809P-201ENST00000482040 297 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 RNA5SP385-201ENST00000515947 110 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 NPM1P35-201ENST00000533043 868 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC068446.3-201ENST00000555285 382 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC120057.2-201ENST00000571520 271 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AL356218.2-201ENST00000605264 187 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.54□□□□□ -2
SMIM27A0A1W2PRY6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SMIM27A0A1W2PRY6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms