Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.52□□□□□ -1.36
PCDHB11Q9Y5F2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.52□□□□□ -1.36
PCDHB11Q9Y5F2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.52□□□□□ -1.36
PCDHB11Q9Y5F2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 HSPE1P11-201ENST00000339579 310 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.149-201ENST00000363558 117 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 RNU6-1188P-201ENST00000363795 107 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MIR558-201ENST00000384920 94 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MIR137-201ENST00000385223 102 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL024474.1-201ENST00000404655 591 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 RPS12P24-201ENST00000412619 387 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MTND4LP17-201ENST00000414607 293 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL713922.1-201ENST00000416477 747 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 NMD3P2-201ENST00000421815 761 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 PFN1P11-201ENST00000445829 389 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MRPS31P2-201ENST00000451581 518 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 RNU7-182P-201ENST00000459009 62 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.653-201ENST00000459091 95 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL049714.1-201ENST00000466686 347 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 RPL7AP23-201ENST00000482625 776 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC092436.1-201ENST00000506450 503 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MTCYBP40-201ENST00000509390 1135 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC091849.1-201ENST00000509920 121 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC093816.1-201ENST00000515076 913 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC011853.1-201ENST00000518911 454 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC008269.2-201ENST00000561915 1105 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AP005119.1-201ENST00000580956 292 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC012368.3-201ENST00000604190 219 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC243654.2-201ENST00000612843 443 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL159972.1-201ENST00000625150 448 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 CYP3A51P-201ENST00000633513 256 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 XPOTP1-201ENST00000443317 2398 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AC091046.3-201ENST00000631455 1574 ntBASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHB11Q9Y5F2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AL136531.3-201ENST00000624378 3658 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AC011460.1-201ENST00000636268 1834 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.158-201ENST00000363651 101 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 RN7SKP237-201ENST00000364663 301 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 MIR323B-201ENST00000385269 82 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 MIR1302-3-201ENST00000408128 138 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 RNU2-29P-201ENST00000410423 189 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 OR6C66P-201ENST00000414917 930 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AC009302.1-201ENST00000417147 390 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 GAPDHP37-201ENST00000442317 968 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 RNU7-180P-201ENST00000459240 63 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AL049874.2-201ENST00000492636 288 ntBASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHB11Q9Y5F2 RNU6-273P-201ENST00000516937 96 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms