Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC008638.1-201ENST00000506035 866 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 RNU6-408P-201ENST00000515910 100 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 RN7SKP219-201ENST00000516825 296 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 RNA5SP337-201ENST00000517007 109 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 RNA5SP454-201ENST00000517231 127 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AL356432.3-201ENST00000568952 465 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 MIR4489-201ENST00000578869 62 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 BNIP3P16-201ENST00000589779 534 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC004805.2-201ENST00000605382 482 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 MIR6809-201ENST00000612189 116 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 MIR6793-201ENST00000612376 63 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC015712.7-201ENST00000615211 635 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AL023806.3-201ENST00000638502 2704 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 MTND5P30-201ENST00000452896 1731 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 AC062022.1-201ENST00000451026 1684 ntBASIC8.62□□□□□ -1.03
PHF8Q9UPP1 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.62□□□□□ -1.03
PHF8Q9UPP1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC011455.2-201ENST00000599320 3336 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 TMEM75-201ENST00000624314 2165 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 RPS4XP9-201ENST00000405151 780 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 RN7SKP286-201ENST00000410894 299 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC080125.1-201ENST00000414888 684 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 RPS15AP12-201ENST00000419498 388 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AL035660.1-201ENST00000422041 222 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 RPL23AP4-201ENST00000427757 463 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 HMGB3P11-201ENST00000440127 604 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AP1S2P1-201ENST00000457344 379 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 TMEM251P1-201ENST00000503717 318 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AP000857.1-201ENST00000532151 543 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AL352984.2-201ENST00000611153 546 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 MIR7159-201ENST00000620587 66 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 AC243312.2-201ENST00000623340 601 ntBASIC8.61□□□□□ -1.03
PHF8Q9UPP1 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.61□□□□□ -1.03
PHF8Q9UPP1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC119744.1-201ENST00000454746 1715 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 Y_RNA.212-201ENST00000364177 102 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 Y_RNA.463-201ENST00000384271 102 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 MIR320B1-201ENST00000390209 79 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms