Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 SNORA11.1-201ENST00000408133 129 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 RN7SKP159-201ENST00000410657 292 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 HMGB3P5-201ENST00000428894 612 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 RPL7P28-201ENST00000437739 740 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 HMGB1P16-201ENST00000447155 540 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 RN7SL542P-201ENST00000467147 294 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 MIR3944-201ENST00000581277 108 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 VN1R84P-201ENST00000593697 235 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 AC008739.3-201ENST00000603262 127 ntBASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA3Q9UI47 RLIMP1-201ENST00000339626 1680 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 RPS6P12-201ENST00000432491 726 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AC091959.2-201ENST00000477363 321 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 RNA5SP143-201ENST00000516936 115 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 RNU1-45P-201ENST00000517191 141 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AC139769.3-201ENST00000618383 175 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 AC124312.6-202ENST00000623624 418 ntBASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA3Q9UI47 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC134882.1-201ENST00000603738 1676 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 RNA5SP283-201ENST00000365604 119 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 RNU1-89P-201ENST00000384592 164 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 RPL7AP73-201ENST00000413490 353 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC092647.1-201ENST00000420654 287 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 YY1P1-201ENST00000427625 668 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 HIGD1AP4-201ENST00000430194 280 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AL117339.2-201ENST00000430475 180 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC007389.2-201ENST00000434630 306 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AF228730.2-201ENST00000438784 848 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 VN1R25P-201ENST00000443385 738 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC006326.1-201ENST00000445465 787 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 VN1R40P-201ENST00000455196 941 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 RPL7L1P8-201ENST00000469911 741 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 GNRHR2P1-201ENST00000555315 631 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC024220.1-201ENST00000603675 484 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AL049844.2-201ENST00000604280 628 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC128687.2-201ENST00000609657 566 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AP000255.1-201ENST00000610276 676 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AC123768.4-201ENST00000616244 701 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 AL139089.1-201ENST00000620372 975 ntBASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA3Q9UI47 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms