Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HMGN1P36-201ENST00000446623 298 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL445665.1-202ENST00000452436 324 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 HIGD1AP8-201ENST00000453927 274 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC139783.2-201ENST00000504847 1145 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 MTND6P2-201ENST00000512226 524 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 PMS2P3-207ENST00000529061 717 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 HMGN2P36-201ENST00000529541 409 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 OR4A12P-201ENST00000530847 918 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC037471.2-201ENST00000564941 598 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 TXNP4-201ENST00000575018 310 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC068790.5-201ENST00000602741 355 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL132765.2-201ENST00000610812 351 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL139099.4-201ENST00000614802 114 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC024560.2-201ENST00000507981 1497 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC005725.1-201ENST00000577346 2607 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 MRE11P1-201ENST00000464884 2127 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC022031.1-201ENST00000585985 2593 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AP005432.1-201ENST00000580891 3485 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 Y_RNA.157-201ENST00000363638 102 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 RNA5SP435-201ENST00000364044 108 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 RN7SKP269-201ENST00000365545 319 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 RNU6-332P-201ENST00000391193 108 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 Z97832.1-201ENST00000402490 328 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 DPPA2P2-201ENST00000418220 897 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 GTF2IP20-201ENST00000431663 360 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 RPS12P17-201ENST00000438591 377 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC140076.1-201ENST00000449897 361 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL513533.1-201ENST00000453728 415 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 HMGN3P1-201ENST00000453847 193 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC093166.4-201ENST00000457867 318 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 RNU6-420P-201ENST00000458780 107 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 PPIAP19-201ENST00000486414 492 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 RPL7P51-201ENST00000490532 749 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC109481.1-201ENST00000509173 282 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 HSPE1P2-201ENST00000554777 306 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC015917.1-201ENST00000579654 510 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 YWHAQP7-201ENST00000603536 658 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 MIR98-201ENST00000606724 119 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC015712.7-201ENST00000615211 635 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AL355974.3-201ENST00000617383 467 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 YWHAEP7-203ENST00000622054 312 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC093775.1-201ENST00000624154 1868 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 GTF2IP4-201ENST00000453092 2054 ntBASIC6.38□□□□□ -1.39
CNTN3Q9P232 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CNTN3Q9P232 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms