Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP4Q96DX8 SNORD116-1-201ENST00000384335 95 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 Y_RNA.578-201ENST00000390903 88 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 SNORD65C-201ENST00000390962 71 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 U3.22-201ENST00000391120 215 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 VDAC2P1-201ENST00000399358 958 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 SFR1P1-201ENST00000403720 688 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL136310.1-201ENST00000404926 654 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 GSTM3P2-201ENST00000412746 530 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL356320.2-201ENST00000417263 507 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC073335.1-201ENST00000427776 363 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 THAP5P1-201ENST00000439089 262 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 HSFY3P-201ENST00000444242 1191 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 SEPT14P24-201ENST00000447236 180 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 ABCF2P2-201ENST00000450549 296 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 RPL10P17-201ENST00000453852 316 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 RPS6P2-201ENST00000454208 705 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC079804.1-201ENST00000461922 436 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC068587.1-201ENST00000483613 781 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC008837.1-201ENST00000511513 412 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AP001781.1-201ENST00000530977 207 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC011611.5-201ENST00000552477 578 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AP005119.2-201ENST00000579735 1105 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 PIGPP4-201ENST00000584447 307 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC015688.2-201ENST00000584523 262 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC124856.1-201ENST00000600819 896 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL109653.1-201ENST00000603091 248 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL356274.1-201ENST00000617064 410 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 MIR3974-201ENST00000637126 96 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 LINC01808-202ENST00000641680 1116 ntBASIC4.53□□□□□ -1.68
RTP4Q96DX8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.53□□□□□ -1.68
RTP4Q96DX8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
RTP4Q96DX8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RTP4Q96DX8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RTP4Q96DX8 MTND4P10-201ENST00000446199 1363 ntBASIC4.53□□□□□ -1.69
RTP4Q96DX8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTP4Q96DX8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AL592148.3-201ENST00000608771 2646 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTP4Q96DX8 MAPK10-349ENST00000641767 3661 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 RNU1-15P-201ENST00000353977 144 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 RNU6-224P-201ENST00000384055 107 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 HMGB1P13-201ENST00000406019 642 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 ELOCP19-201ENST00000411919 318 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 BTF3P8-201ENST00000414577 526 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 BX119904.4-201ENST00000424402 301 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 RPS12P10-201ENST00000427031 377 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 MOB1AP1-201ENST00000430903 535 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 MTCYBP12-201ENST00000440559 1134 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 EEF1A1P39-201ENST00000440791 250 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 PTENP1-201ENST00000447117 1215 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AL162591.2-201ENST00000449634 317 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 OR51B8P-201ENST00000449892 769 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 MTND2P28-201ENST00000457540 1044 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 TPTE2P5-203ENST00000458118 728 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC053481.1-201ENST00000467217 306 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC079203.1-201ENST00000487972 404 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC013356.1-201ENST00000489027 564 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 CDH12P2-201ENST00000504393 298 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 PPBPP1-201ENST00000510807 373 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
RTP4Q96DX8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.52□□□□□ -1.69
RTP4Q96DX8 AC006518.2-201ENST00000542513 940 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms