Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 MTATP6P3-201ENST00000581686 676 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AL390838.2-201ENST00000602394 274 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 NTAN1P1-201ENST00000603150 646 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC006270.3-201ENST00000605967 1036 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC079395.2-201ENST00000610982 737 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 MIR7973-1-201ENST00000614683 76 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC015540.1-201ENST00000615828 501 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC073968.1-201ENST00000618594 637 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC018755.4-201ENST00000619715 454 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC073348.1-201ENST00000623002 331 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC127502.3-201ENST00000636170 1206 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 SAMMSON-209ENST00000641222 1100 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ERCC4Q92889 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ERCC4Q92889 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 MAPK10-349ENST00000641767 3661 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 HSPA8P17-201ENST00000427029 1382 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 IGKV7-3-201ENST00000357453 298 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 U3.4-201ENST00000363352 213 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RN7SKP224-201ENST00000364140 325 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 MIR1271-201ENST00000408537 86 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RPL7P8-201ENST00000411964 730 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 RPL7L1P9-201ENST00000431298 745 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AL050321.1-201ENST00000432363 400 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RPL21P110-201ENST00000433345 446 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RPL35AP21-201ENST00000437667 333 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 COX6CP2-201ENST00000444980 225 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 AL691482.1-201ENST00000453255 87 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC091180.1-201ENST00000462104 372 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AL591473.1-201ENST00000464297 313 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 PGAM1P13-201ENST00000507497 754 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 RN7SKP46-201ENST00000515942 234 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.7□□□□□ -1.5
ERCC4Q92889 IGKV2-18-201ENST00000522607 343 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 AC012414.6-201ENST00000568241 401 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC4Q92889 AC008507.1-201ENST00000587506 734 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AP003973.1-201ENST00000604639 691 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC100793.4-201ENST00000613683 429 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC022306.2-201ENST00000617563 647 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 MIR6826-201ENST00000617808 98 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 AC069209.1-201ENST00000619282 651 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC4Q92889 SALL4P2-201ENST00000423288 2910 ntBASIC5.7□□□□□ -1.5
ERCC4Q92889 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC4Q92889 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC4Q92889 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC4Q92889 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC4Q92889 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC4Q92889 RNU6-839P-201ENST00000363347 108 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 RNU6-517P-201ENST00000384362 110 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms