Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL121594.4-201ENST00000556211 1196 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 AC138932.5-201ENST00000617759 563 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 AL645937.1-201ENST00000641739 1652 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOPBP1Q92547 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOPBP1Q92547 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOPBP1Q92547 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOPBP1Q92547 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOPBP1Q92547 NACA3P-201ENST00000359690 648 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 AC063979.1-201ENST00000415539 377 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.89□□□□□ -1.47
TOPBP1Q92547 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.89□□□□□ -1.47
TOPBP1Q92547 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.89□□□□□ -1.47
TOPBP1Q92547 RPS27AP1-201ENST00000475545 471 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 SUMO2P20-201ENST00000520803 283 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.89□□□□□ -1.47
TOPBP1Q92547 AC128687.2-201ENST00000609657 566 ntBASIC5.89□□□□□ -1.47
TOPBP1Q92547 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 HCFC2P1-201ENST00000392864 1592 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 MTHFD2P2-201ENST00000407725 247 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 AC099563.1-201ENST00000456086 418 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 AC109925.1-201ENST00000478069 331 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 TRBV12-2-201ENST00000489763 344 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 AL121603.1-201ENST00000553815 142 ntBASIC5.88□□□□□ -1.47
TOPBP1Q92547 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TOPBP1Q92547 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TOPBP1Q92547 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOPBP1Q92547 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOPBP1Q92547 SAGE2P-201ENST00000420011 2126 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 RNA5SP80-201ENST00000410475 111 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 RN7SKP284-201ENST00000411002 343 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 RPL7P48-201ENST00000461513 746 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 AC021146.3-201ENST00000511911 260 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 UBTFL9-201ENST00000534504 1148 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 MTND6P33-201ENST00000571794 183 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 AC009464.1-201ENST00000615731 469 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.87□□□□□ -1.47
TOPBP1Q92547 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TOPBP1Q92547 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
TOPBP1Q92547 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOPBP1Q92547 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOPBP1Q92547 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 Z83843.1-201ENST00000604070 3685 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOPBP1Q92547 HLFP1-201ENST00000402375 499 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 AC093698.1-201ENST00000423843 571 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 TPTE2P3-201ENST00000441562 1189 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 AC098824.1-201ENST00000453565 980 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 FCF1P8-201ENST00000510322 597 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 AC093732.2-201ENST00000607950 274 ntBASIC5.86□□□□□ -1.47
TOPBP1Q92547 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.86□□□□□ -1.47
TOPBP1Q92547 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOPBP1Q92547 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOPBP1Q92547 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 RNU1-140P-201ENST00000365040 165 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 RNU6-301P-201ENST00000384277 107 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 NPM1P39-201ENST00000449818 867 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 AC092747.2-201ENST00000545069 983 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 AC067852.3-201ENST00000589177 561 ntBASIC5.85□□□□□ -1.47
TOPBP1Q92547 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TOPBP1Q92547 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.85□□□□□ -1.47
TOPBP1Q92547 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOPBP1Q92547 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOPBP1Q92547 U3.39-201ENST00000408569 239 ntBASIC5.84□□□□□ -1.47
TOPBP1Q92547 GSTM3P2-201ENST00000412746 530 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms