Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 SUGT1P1-201ENST00000379514 476 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AL161909.1-201ENST00000397390 712 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 RPL7P53-201ENST00000421245 739 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 EIF4EP1-201ENST00000422311 642 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 SDCBPP2-201ENST00000424643 885 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 DPRXP1-201ENST00000426312 460 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 MTCO1P54-201ENST00000430139 712 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 RPS17P8-201ENST00000434525 335 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 NPM1P49-201ENST00000448027 714 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 PPIAP19-201ENST00000486414 492 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 RN7SL184P-201ENST00000488308 297 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC108693.1-201ENST00000496068 432 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC025164.1-201ENST00000496249 478 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC027309.2-201ENST00000520566 192 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 FKBP1BP1-201ENST00000553366 325 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC008759.1-201ENST00000589783 983 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC068790.7-201ENST00000602347 528 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 Z82195.1-201ENST00000604558 398 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AL049634.3-201ENST00000604968 457 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 MIR6780B-201ENST00000610307 79 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC015813.4-201ENST00000610469 179 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC126175.1-201ENST00000617041 758 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 OR1S1-201ENST00000624470 978 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 AC017104.4-201ENST00000636283 1592 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LINC01561Q8N1V8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 TMSB4XP4-201ENST00000323496 618 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 RNU1-108P-201ENST00000362556 161 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 RN7SKP115-201ENST00000363177 317 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 SNORD96B-201ENST00000386148 79 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 RNU6-298P-201ENST00000390888 96 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 DUTP5-201ENST00000406790 469 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC099535.1-201ENST00000408928 371 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 OR8G2P-201ENST00000412796 908 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC092634.6-201ENST00000418558 192 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 LINC00993-201ENST00000420453 540 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 CYP4F29P-201ENST00000420685 446 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 IPPKP1-201ENST00000422501 768 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 MTCO1P3-201ENST00000429327 192 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 MARK2P15-201ENST00000432204 2186 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 TDGF1P1-201ENST00000445734 527 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 HMGB1P16-201ENST00000447155 540 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 MTCO1P48-201ENST00000448024 1096 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 PNPLA4P1-201ENST00000458328 305 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC022034.3-201ENST00000471393 478 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC012158.1-204ENST00000483430 465 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 HMGN2P25-201ENST00000486956 268 ntBASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01561Q8N1V8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms