Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 RNA5SP479-201ENST00000364858 117 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 SNORA57.1-201ENST00000391227 145 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 PPIAP31-201ENST00000405422 495 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 RNU6-628P-201ENST00000410675 107 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 TPT1P2-201ENST00000413105 503 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL117339.2-201ENST00000430475 180 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC092013.1-201ENST00000438795 332 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC083863.1-201ENST00000438811 231 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC006326.1-201ENST00000445465 787 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 RPS29P31-201ENST00000446147 164 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL162151.2-201ENST00000448875 158 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 RPS17P13-201ENST00000448974 407 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL136097.1-201ENST00000456945 913 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC092691.2-201ENST00000461787 803 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL672167.3-201ENST00000465951 960 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC108064.1-201ENST00000513791 460 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 SNORD116-26-201ENST00000516006 96 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 SUMO2P20-201ENST00000520803 283 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC090877.1-201ENST00000561418 344 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 VN1R85P-201ENST00000601587 426 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 BMS1P7-201ENST00000602440 1052 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC024941.1-201ENST00000612250 334 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 CASC19-261ENST00000641853 1638 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC28Q86X40 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC28Q86X40 ASNSP1-204ENST00000641977 1664 ntBASIC3.43□□□□□ -1.86
LRRC28Q86X40 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC092079.1-201ENST00000558620 1985 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 MIR372-201ENST00000362225 67 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 HMGB3P19-201ENST00000403971 560 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 AL391417.1-201ENST00000404100 426 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 HSPE1P12-201ENST00000412576 301 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 YY1P1-201ENST00000427625 668 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 HMGB3P5-201ENST00000428894 612 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 HMGN2P7-201ENST00000456186 273 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC004801.2-202ENST00000463559 283 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 FTH1P2-201ENST00000466086 412 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 MTND2P17-201ENST00000550281 688 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC084824.1-201ENST00000550917 1005 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AGGF1P6-201ENST00000569213 976 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRC28Q86X40 AC020978.9-201ENST00000624380 1141 ntBASIC3.42□□□□□ -1.86
LRRC28Q86X40 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC28Q86X40 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC28Q86X40 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC28Q86X40 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC28Q86X40 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC28Q86X40 RNA5SP283-201ENST00000365604 119 ntBASIC3.41□□□□□ -1.86
LRRC28Q86X40 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 RPL21P65-201ENST00000406094 466 ntBASIC3.41□□□□□ -1.86
LRRC28Q86X40 RN7SKP285-201ENST00000410137 318 ntBASIC3.41□□□□□ -1.86
LRRC28Q86X40 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC28Q86X40 AC114814.2-201ENST00000419195 485 ntBASIC3.41□□□□□ -1.86
LRRC28Q86X40 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC28Q86X40 HIGD1AP4-201ENST00000430194 280 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms