Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC016957.2-201ENST00000616998 848 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC009032.1-201ENST00000617574 431 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AL359715.5-201ENST00000623431 443 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 LINC00216-201ENST00000623548 1126 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC073530.2-201ENST00000623987 261 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC112484.5-201ENST00000624189 228 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC016717.3-201ENST00000624730 554 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGCS1Q01581 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC017007.4-201ENST00000503353 1352 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS1Q01581 RLIMP1-201ENST00000339626 1680 ntBASIC3.75□□□□□ -1.81
HMGCS1Q01581 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGCS1Q01581 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 OR5T3-201ENST00000303059 1023 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 RNA5SP322-201ENST00000363617 119 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC136624.1-201ENST00000400791 413 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC007563.3-201ENST00000433233 371 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 VN1R48P-201ENST00000448149 1036 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 NUTF2P7-201ENST00000453086 375 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC020910.2-201ENST00000603635 610 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 HMGB1P50-201ENST00000605814 607 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC100814.1-201ENST00000606963 623 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 RNU4-89P-201ENST00000607443 133 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC084036.1-201ENST00000609190 508 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 MIR6867-201ENST00000610636 67 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 NCAPGP1-201ENST00000505112 1814 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.74□□□□□ -1.81
HMGCS1Q01581 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCS1Q01581 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCS1Q01581 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 RNU1-13P-201ENST00000384499 162 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 MIR320B1-201ENST00000390209 79 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 RN7SKP56-201ENST00000410513 331 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 TRGV6-201ENST00000417928 299 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OR4C10P-201ENST00000434991 931 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC114878.1-201ENST00000441166 358 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 RPL5P32-201ENST00000454085 879 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 RPL5P13-201ENST00000462840 709 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC011037.1-201ENST00000483964 558 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC004069.2-201ENST00000505438 1114 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 FABP5P6-201ENST00000510588 409 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 MIR2116-201ENST00000517221 80 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 IGHV3-32-201ENST00000519182 355 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OR4A12P-201ENST00000530847 918 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC007224.1-201ENST00000564410 144 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms