Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NBEAP1-201ENST00000554452 979 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 MTCYBP27-201ENST00000555160 670 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AL132657.2-201ENST00000564417 358 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.91□□□□□ -1.78
CX3CL1P78423 CLIC4P2-201ENST00000601934 717 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 HSPE1P14-201ENST00000605812 302 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AL451074.6-201ENST00000608512 729 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC097478.2-201ENST00000610572 514 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 TUSC7.1-201ENST00000610969 165 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC091905.4-201ENST00000623432 202 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AL353662.3-201ENST00000625131 237 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC026634.1-201ENST00000634369 198 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 MKKS-204ENST00000639674 192 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC099654.2-201ENST00000433031 1980 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CX3CL1P78423 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CX3CL1P78423 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CX3CL1P78423 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CX3CL1P78423 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CX3CL1P78423 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CX3CL1P78423 OR4A15-201ENST00000314706 1035 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 RNU6-921P-201ENST00000384361 107 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 SNORA70-201ENST00000384436 135 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 MIR105-2-201ENST00000385083 81 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AF228730.1-201ENST00000397972 663 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC119751.3-201ENST00000399720 670 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 NUP35P2-201ENST00000416748 943 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 VPS26BP1-201ENST00000417155 755 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.9□□□□□ -1.79
CX3CL1P78423 E2F6P2-201ENST00000420708 748 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 MTCO3P1-205ENST00000422088 832 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC005345.1-201ENST00000431868 217 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 B3GNT2P1-201ENST00000434960 952 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.9□□□□□ -1.79
CX3CL1P78423 PRPF38AP2-201ENST00000438179 851 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC073587.1-201ENST00000447093 876 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 MTND1P31-201ENST00000449206 961 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 IFNWP4-201ENST00000453148 294 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 MTCO2P6-201ENST00000463134 685 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AP000893.1-201ENST00000474462 794 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC004453.1-201ENST00000487895 408 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 RN7SL808P-201ENST00000496066 299 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC105233.1-201ENST00000498840 781 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 MRPS33P2-201ENST00000507850 322 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 OR5H4P-201ENST00000510851 923 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC021146.3-201ENST00000511911 260 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.9□□□□□ -1.79
CX3CL1P78423 RNA5SP360-201ENST00000516555 118 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 RNU5A-4P-201ENST00000516588 111 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 Y_RNA.719-201ENST00000517156 106 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC074029.1-201ENST00000552531 1044 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC138915.2-201ENST00000569776 97 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC074051.3-201ENST00000570238 358 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC008536.1-201ENST00000602872 669 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 DUXAP3-201ENST00000603616 594 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC113194.1-201ENST00000606037 500 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AL445222.1-201ENST00000607259 628 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AP001521.2-201ENST00000608772 546 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC018445.2-201ENST00000622987 260 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC097655.1-201ENST00000635075 318 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CL1P78423 AC068620.4-201ENST00000636730 1182 ntBASIC3.9□□□□□ -1.79
CX3CL1P78423 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CX3CL1P78423 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms