Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-500P-201ENST00000362349 107 ntBASIC4.64□□□□□ -1.67
RAE1P78406 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 AL078599.1-201ENST00000402075 293 ntBASIC4.64□□□□□ -1.67
RAE1P78406 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 FCF1P2-201ENST00000415284 583 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC092634.6-201ENST00000418558 192 ntBASIC4.64□□□□□ -1.67
RAE1P78406 TIMM9P2-201ENST00000419324 266 ntBASIC4.64□□□□□ -1.67
RAE1P78406 RPL36AP10-201ENST00000421785 322 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC010153.1-201ENST00000432862 727 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 AC096638.2-201ENST00000434965 711 ntBASIC4.64□□□□□ -1.67
RAE1P78406 RPL7P11-201ENST00000437586 658 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 NPM1P39-201ENST00000449818 867 ntBASIC4.64□□□□□ -1.67
RAE1P78406 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 SETP11-201ENST00000473027 690 ntBASIC4.64□□□□□ -1.67
RAE1P78406 RPL7P38-201ENST00000488396 739 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC020890.1-201ENST00000491837 504 ntBASIC4.64□□□□□ -1.67
RAE1P78406 RPS6P4-201ENST00000494693 758 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.64□□□□□ -1.67
RAE1P78406 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 AC104685.1-201ENST00000502445 371 ntBASIC4.64□□□□□ -1.67
RAE1P78406 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 AC011411.1-201ENST00000509592 876 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 Y_RNA.719-201ENST00000517156 106 ntBASIC4.64□□□□□ -1.67
RAE1P78406 RNU6-1261P-201ENST00000517194 104 ntBASIC4.64□□□□□ -1.67
RAE1P78406 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 AL049839.1-201ENST00000556151 657 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC087477.6-201ENST00000559595 843 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.64□□□□□ -1.67
RAE1P78406 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.64□□□□□ -1.67
RAE1P78406 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.64□□□□□ -1.67
RAE1P78406 AC006270.3-201ENST00000605967 1036 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AC010424.2-201ENST00000607594 443 ntBASIC4.64□□□□□ -1.67
RAE1P78406 OR2L1P-202ENST00000641567 1023 ntBASIC4.64□□□□□ -1.67
RAE1P78406 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RAE1P78406 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 AL034370.1-201ENST00000397254 1590 ntBASIC4.64□□□□□ -1.67
RAE1P78406 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RAE1P78406 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RAE1P78406 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 AC025125.1-201ENST00000624743 1922 ntBASIC4.64□□□□□ -1.67
RAE1P78406 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 AL390237.1-201ENST00000404226 1415 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC073429.2-201ENST00000569694 1444 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 SALL4P2-201ENST00000423288 2910 ntBASIC4.63□□□□□ -1.67
RAE1P78406 NCLP2-201ENST00000416078 1462 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL390862.1-201ENST00000635467 1469 ntBASIC4.63□□□□□ -1.67
RAE1P78406 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.63□□□□□ -1.67
RAE1P78406 SAMMSON-213ENST00000641336 1521 ntBASIC4.63□□□□□ -1.67
RAE1P78406 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 AC093849.1-201ENST00000563631 2209 ntBASIC4.63□□□□□ -1.67
RAE1P78406 SNORA70-201ENST00000384436 135 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MIR765-201ENST00000390226 114 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL138880.1-201ENST00000405824 642 ntBASIC4.63□□□□□ -1.67
RAE1P78406 U3.35-201ENST00000408405 208 ntBASIC4.63□□□□□ -1.67
RAE1P78406 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 RN7SKP229-201ENST00000410465 302 ntBASIC4.63□□□□□ -1.67
RAE1P78406 RNU6-920P-201ENST00000410926 92 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL136133.1-201ENST00000413694 376 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.63□□□□□ -1.67
RAE1P78406 HSFY4P-201ENST00000415994 1181 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 E2F6P2-201ENST00000420708 748 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC233981.1-201ENST00000423224 461 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.63□□□□□ -1.67
RAE1P78406 AC093414.1-201ENST00000434712 514 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 AL360221.1-201ENST00000445989 335 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC002553.2-201ENST00000453217 340 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 RPS15AP1-201ENST00000457423 391 ntBASIC4.63□□□□□ -1.67
RAE1P78406 RN7SL558P-201ENST00000497468 299 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.63□□□□□ -1.67
RAE1P78406 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 AC006499.3-201ENST00000506077 748 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MTATP6P22-201ENST00000507369 598 ntBASIC4.63□□□□□ -1.67
RAE1P78406 SNORA48.10-201ENST00000516965 160 ntBASIC4.63□□□□□ -1.67
RAE1P78406 RN7SKP147-201ENST00000517154 244 ntBASIC4.63□□□□□ -1.67
RAE1P78406 RNU6-709P-201ENST00000517257 104 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.63□□□□□ -1.67
RAE1P78406 SMARCE1P4-201ENST00000523647 241 ntBASIC4.63□□□□□ -1.67
RAE1P78406 OR5AK1P-201ENST00000524837 922 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms