Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 MIR133A2-201ENST00000347538 102 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC092642.1-201ENST00000392417 425 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 EIF5P1-201ENST00000400019 1231 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AL391361.1-201ENST00000405580 489 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 RN7SKP273-201ENST00000411392 314 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC079809.1-201ENST00000415468 276 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RPS15AP40-201ENST00000419621 391 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 KCTD10P1-201ENST00000434203 625 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 TMX2P1-201ENST00000436507 708 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RPL23AP74-201ENST00000437246 471 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 EEF1E1P1-201ENST00000446998 430 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC026410.2-201ENST00000460281 156 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RN7SL189P-201ENST00000468631 289 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AL049874.2-201ENST00000492636 288 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RPS4XP20-201ENST00000505751 772 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC016559.2-201ENST00000510759 359 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RNA5SP373-201ENST00000517271 95 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC104986.1-201ENST00000517978 436 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 OR4A45P-201ENST00000529954 901 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.79□□□□□ -1.64
SUMO3P55854 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 MTCYBP13-201ENST00000578634 1093 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.79□□□□□ -1.64
SUMO3P55854 AC010857.1-201ENST00000606398 594 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 RN7SKP299-201ENST00000606679 301 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AL159169.3-201ENST00000608871 561 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 HULC.1-201ENST00000612720 240 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.79□□□□□ -1.64
SUMO3P55854 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.79□□□□□ -1.64
SUMO3P55854 CYP4F35P-202ENST00000636121 390 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 AC135068.12-201ENST00000637370 931 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.79□□□□□ -1.64
SUMO3P55854 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 HSPA8P14-201ENST00000552265 1805 ntBASIC4.79□□□□□ -1.64
SUMO3P55854 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SUMO3P55854 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SUMO3P55854 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SUMO3P55854 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SUMO3P55854 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SUMO3P55854 AP001029.2-203ENST00000589795 4910 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.78□□□□□ -1.64
SUMO3P55854 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SUMO3P55854 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.78□□□□□ -1.64
SUMO3P55854 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.78□□□□□ -1.64
SUMO3P55854 RNU4-21P-201ENST00000362802 126 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 U3.3-201ENST00000362986 216 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 RNA5SP223-201ENST00000365174 120 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 AL024474.1-201ENST00000404655 591 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 AL390316.1-201ENST00000406279 553 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.78□□□□□ -1.64
SUMO3P55854 AC079355.1-201ENST00000421770 223 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.78□□□□□ -1.64
SUMO3P55854 VTI1BP4-201ENST00000427516 527 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 OR4F13P-201ENST00000428478 931 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 AL512649.1-201ENST00000428997 581 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 AL512286.1-201ENST00000439244 400 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.78□□□□□ -1.64
SUMO3P55854 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.78□□□□□ -1.64
SUMO3P55854 COX6CP2-201ENST00000444980 225 ntBASIC4.78□□□□□ -1.64
SUMO3P55854 NOP56P2-201ENST00000447491 769 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms