Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDH12P55289 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 U8.4-201ENST00000363626 134 ntBASIC4.41□□□□□ -1.7
CDH12P55289 MIR195-201ENST00000385194 87 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AL590084.2-201ENST00000401481 382 ntBASIC4.41□□□□□ -1.7
CDH12P55289 SNORA11.3-201ENST00000408471 128 ntBASIC4.41□□□□□ -1.7
CDH12P55289 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 TRGV6-201ENST00000417928 299 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC019050.1-201ENST00000418508 492 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC098592.1-201ENST00000419352 333 ntBASIC4.41□□□□□ -1.7
CDH12P55289 OR2AM1P-201ENST00000422137 422 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 AL354941.1-201ENST00000438600 464 ntBASIC4.41□□□□□ -1.7
CDH12P55289 ARL4AP3-201ENST00000441452 574 ntBASIC4.41□□□□□ -1.7
CDH12P55289 UBE2D3P4-201ENST00000441973 436 ntBASIC4.41□□□□□ -1.7
CDH12P55289 MTCYBP3-201ENST00000445588 1137 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AL606662.1-201ENST00000445763 553 ntBASIC4.41□□□□□ -1.7
CDH12P55289 MTCO2P25-201ENST00000447065 681 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC104651.2-201ENST00000447549 528 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RPL7P59-201ENST00000447700 943 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RSL24D1P3-201ENST00000449255 495 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RNU6-1218P-201ENST00000458990 108 ntBASIC4.41□□□□□ -1.7
CDH12P55289 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 MTND3P7-201ENST00000474435 343 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RPL7P18-201ENST00000478965 734 ntBASIC4.41□□□□□ -1.7
CDH12P55289 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 LINC00888-204ENST00000487386 421 ntBASIC4.41□□□□□ -1.7
CDH12P55289 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC008953.1-201ENST00000497334 318 ntBASIC4.41□□□□□ -1.7
CDH12P55289 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 AC010587.2-201ENST00000511727 448 ntBASIC4.41□□□□□ -1.7
CDH12P55289 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 RNU6-1225P-201ENST00000516336 65 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RNA5SP135-201ENST00000517019 125 ntBASIC4.41□□□□□ -1.7
CDH12P55289 RNU6-232P-201ENST00000517144 64 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC105185.1-201ENST00000518705 535 ntBASIC4.41□□□□□ -1.7
CDH12P55289 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 MIR4999-201ENST00000585029 91 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH12P55289 AC009163.6-201ENST00000612367 342 ntBASIC4.41□□□□□ -1.7
CDH12P55289 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH12P55289 SNORA11.6-201ENST00000619030 128 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AP001005.3-201ENST00000622049 129 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 AC010608.2-201ENST00000624830 470 ntBASIC4.41□□□□□ -1.7
CDH12P55289 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 AC099654.2-201ENST00000433031 1980 ntBASIC4.41□□□□□ -1.7
CDH12P55289 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 AC087190.4-201ENST00000574616 8334 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH12P55289 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH12P55289 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH12P55289 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH12P55289 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH12P55289 AP001273.1-201ENST00000624493 3152 ntBASIC4.4□□□□□ -1.7
CDH12P55289 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDH12P55289 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH12P55289 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH12P55289 AL512646.1-201ENST00000269395 1077 ntBASIC4.4□□□□□ -1.71
CDH12P55289 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH12P55289 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 RNU6-304P-201ENST00000364855 107 ntBASIC4.4□□□□□ -1.71
CDH12P55289 Y_RNA.318-201ENST00000365131 97 ntBASIC4.4□□□□□ -1.71
CDH12P55289 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH12P55289 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RPL7P57-201ENST00000423238 740 ntBASIC4.4□□□□□ -1.71
CDH12P55289 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 TMX2P1-201ENST00000436507 708 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RPL7P11-201ENST00000437586 658 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 EEF1B2P5-201ENST00000444820 548 ntBASIC4.4□□□□□ -1.71
CDH12P55289 MTND2P4-201ENST00000445034 1004 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 TPMTP4-201ENST00000450749 678 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RPS27AP8-201ENST00000452665 445 ntBASIC4.4□□□□□ -1.71
CDH12P55289 PNPLA4P1-201ENST00000458328 305 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms