Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BTF3P10-201ENST00000433415 495 ntBASIC4.51□□□□□ -1.69
VCPP55072 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.51□□□□□ -1.69
VCPP55072 AP002345.1-201ENST00000456493 928 ntBASIC4.51□□□□□ -1.69
VCPP55072 RPL35AP15-201ENST00000468042 339 ntBASIC4.51□□□□□ -1.69
VCPP55072 S100A11P1-201ENST00000477525 312 ntBASIC4.51□□□□□ -1.69
VCPP55072 RPL35P6-201ENST00000490024 372 ntBASIC4.51□□□□□ -1.69
VCPP55072 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.51□□□□□ -1.69
VCPP55072 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.51□□□□□ -1.69
VCPP55072 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 AC021146.7-201ENST00000509604 775 ntBASIC4.51□□□□□ -1.69
VCPP55072 IFITM8P-201ENST00000522529 394 ntBASIC4.51□□□□□ -1.69
VCPP55072 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VCPP55072 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.51□□□□□ -1.69
VCPP55072 AL352979.3-201ENST00000553515 247 ntBASIC4.51□□□□□ -1.69
VCPP55072 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.51□□□□□ -1.69
VCPP55072 HSPE1P5-201ENST00000561489 272 ntBASIC4.51□□□□□ -1.69
VCPP55072 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.51□□□□□ -1.69
VCPP55072 AC007423.1-201ENST00000605009 627 ntBASIC4.51□□□□□ -1.69
VCPP55072 AL096803.3-201ENST00000609032 532 ntBASIC4.51□□□□□ -1.69
VCPP55072 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.51□□□□□ -1.69
VCPP55072 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VCPP55072 AL162233.1-201ENST00000620014 944 ntBASIC4.51□□□□□ -1.69
VCPP55072 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VCPP55072 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.51□□□□□ -1.69
VCPP55072 AC017002.4-201ENST00000604721 1525 ntBASIC4.51□□□□□ -1.69
VCPP55072 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 FAM91A3P-201ENST00000456826 2544 ntBASIC4.5□□□□□ -1.69
VCPP55072 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VCPP55072 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.5□□□□□ -1.69
VCPP55072 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VCPP55072 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VCPP55072 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.5□□□□□ -1.69
VCPP55072 AC012020.1-201ENST00000624541 1728 ntBASIC4.5□□□□□ -1.69
VCPP55072 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.5□□□□□ -1.69
VCPP55072 Y_RNA.111-201ENST00000363248 100 ntBASIC4.5□□□□□ -1.69
VCPP55072 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VCPP55072 RNU6-883P-201ENST00000384597 107 ntBASIC4.5□□□□□ -1.69
VCPP55072 MIR93-201ENST00000385024 80 ntBASIC4.5□□□□□ -1.69
VCPP55072 MIR634-201ENST00000385208 97 ntBASIC4.5□□□□□ -1.69
VCPP55072 MIR3065-201ENST00000390137 79 ntBASIC4.5□□□□□ -1.69
VCPP55072 SNORD66.1-201ENST00000391230 76 ntBASIC4.5□□□□□ -1.69
VCPP55072 GSTA12P-201ENST00000402398 508 ntBASIC4.5□□□□□ -1.69
VCPP55072 RN7SKP33-201ENST00000410942 340 ntBASIC4.5□□□□□ -1.69
VCPP55072 MTATP6P19-201ENST00000413797 659 ntBASIC4.5□□□□□ -1.69
VCPP55072 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VCPP55072 AC007563.3-201ENST00000433233 371 ntBASIC4.5□□□□□ -1.69
VCPP55072 RN7SL691P-201ENST00000494487 301 ntBASIC4.5□□□□□ -1.69
VCPP55072 FABP5P6-201ENST00000510588 409 ntBASIC4.5□□□□□ -1.69
VCPP55072 HMGB1P47-201ENST00000511281 589 ntBASIC4.5□□□□□ -1.69
VCPP55072 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.5□□□□□ -1.69
VCPP55072 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.5□□□□□ -1.69
VCPP55072 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.5□□□□□ -1.69
VCPP55072 MIR5685-201ENST00000579080 79 ntBASIC4.5□□□□□ -1.69
VCPP55072 AC011471.1-201ENST00000585766 187 ntBASIC4.5□□□□□ -1.69
VCPP55072 AC139769.3-201ENST00000618383 175 ntBASIC4.5□□□□□ -1.69
VCPP55072 AL445363.3-201ENST00000623080 671 ntBASIC4.5□□□□□ -1.69
VCPP55072 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VCPP55072 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
VCPP55072 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 OR11H5P-202ENST00000641612 1325 ntBASIC4.49□□□□□ -1.69
VCPP55072 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VCPP55072 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VCPP55072 PNPT1P2-201ENST00000456768 2050 ntBASIC4.49□□□□□ -1.69
VCPP55072 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VCPP55072 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VCPP55072 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 TCEA1P4-201ENST00000415066 844 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC068533.1-201ENST00000418542 415 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
VCPP55072 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.49□□□□□ -1.69
VCPP55072 AL500527.1-201ENST00000448532 255 ntBASIC4.49□□□□□ -1.69
VCPP55072 RPL7P15-201ENST00000461190 712 ntBASIC4.49□□□□□ -1.69
VCPP55072 RPS26P3-201ENST00000470205 348 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC007688.1-201ENST00000475592 759 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC090543.2-201ENST00000483963 348 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC004057.1-201ENST00000485827 348 ntBASIC4.49□□□□□ -1.69
VCPP55072 RN7SL812P-201ENST00000493791 279 ntBASIC4.49□□□□□ -1.69
VCPP55072 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.49□□□□□ -1.69
VCPP55072 RNA5SP154-201ENST00000516193 111 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC087272.1-201ENST00000523624 533 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.49□□□□□ -1.69
VCPP55072 AL731537.2-201ENST00000561565 951 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.49□□□□□ -1.69
VCPP55072 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.49□□□□□ -1.69
VCPP55072 AL139395.1-201ENST00000603662 160 ntBASIC4.49□□□□□ -1.69
VCPP55072 OR2BH1P-201ENST00000608850 864 ntBASIC4.49□□□□□ -1.69
VCPP55072 AL121772.2-201ENST00000614331 297 ntBASIC4.49□□□□□ -1.69
VCPP55072 AC020978.9-201ENST00000624380 1141 ntBASIC4.49□□□□□ -1.69
VCPP55072 FP325313.1-201ENST00000638228 703 ntBASIC4.49□□□□□ -1.69
VCPP55072 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
VCPP55072 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms