Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 COX6CP15-201ENST00000426313 211 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 YWHAEP5-201ENST00000431545 765 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN3P51790 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC009263.1-201ENST00000441193 1239 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AL358794.1-201ENST00000445689 381 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC099063.2-201ENST00000446360 662 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 EEF1A1P1-201ENST00000447052 739 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 CDC42P1-201ENST00000456658 548 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 RPS7P7-201ENST00000463499 571 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLCN3P51790 TRBV8-2-201ENST00000475637 270 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 RPS27AP13-201ENST00000498403 237 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC119751.1-201ENST00000513357 765 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 PRELID3BP4-201ENST00000515476 571 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC124293.1-201ENST00000530034 493 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC139103.1-201ENST00000534696 1030 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 AL390334.1-201ENST00000556395 450 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 RPL23AP97-201ENST00000568955 471 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 RPL7P50-201ENST00000600588 727 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC243654.2-201ENST00000612843 443 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 CYCSP41-201ENST00000616920 296 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC005086.4-201ENST00000623065 213 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 MIR492-201ENST00000638676 116 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC139713.2-210ENST00000641741 992 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN3P51790 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN3P51790 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CLCN3P51790 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN3P51790 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.73□□□□□ -1.65
CLCN3P51790 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLCN3P51790 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 ATP5F1P2-201ENST00000398143 760 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN3P51790 VPS26BP1-201ENST00000417155 755 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 COX6B1P7-201ENST00000430845 235 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC092013.1-201ENST00000438795 332 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 TPMTP4-201ENST00000450749 678 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AL445433.1-201ENST00000457507 257 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 RPL7AP28-201ENST00000464513 571 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 RPL6P9-201ENST00000466502 859 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.73□□□□□ -1.65
CLCN3P51790 HPRT1P2-201ENST00000505250 544 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN3P51790 AL592156.1-201ENST00000508758 304 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 RNU6-1028P-201ENST00000517164 93 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 OR8I1P-201ENST00000529291 931 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.73□□□□□ -1.65
CLCN3P51790 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 AC006518.2-201ENST00000542513 940 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 ZNF971P-201ENST00000562068 1249 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 RN7SL600P-201ENST00000581811 299 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN3P51790 AL020997.2-201ENST00000602607 184 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC090948.2-201ENST00000607363 564 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 FAM27D1-201ENST00000612308 341 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 AC140725.3-201ENST00000616193 880 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 SNX18P1Y-201ENST00000616231 511 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN3P51790 RNA5SP196-201ENST00000625967 102 ntBASIC4.73□□□□□ -1.65
CLCN3P51790 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms