Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 HCFC2P1-201ENST00000392864 1592 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SMARCA2P51531 AC093849.1-201ENST00000563631 2209 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SMARCA2P51531 AL139095.1-201ENST00000404326 391 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 GSTM3P2-201ENST00000412746 530 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 KCTD9P3-201ENST00000434597 1169 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 AC010655.1-201ENST00000449336 292 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 AC233982.1-201ENST00000451247 436 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 AC139783.2-201ENST00000504847 1145 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.42□□□□□ -1.38
SMARCA2P51531 AC013412.1-201ENST00000610687 192 ntBASIC6.42□□□□□ -1.38
SMARCA2P51531 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.42□□□□□ -1.38
SMARCA2P51531 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.42□□□□□ -1.38
SMARCA2P51531 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SMARCA2P51531 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SMARCA2P51531 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SMARCA2P51531 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.42□□□□□ -1.38
SMARCA2P51531 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMARCA2P51531 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.41□□□□□ -1.38
SMARCA2P51531 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMARCA2P51531 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.41□□□□□ -1.38
SMARCA2P51531 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SMARCA2P51531 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SMARCA2P51531 AL691447.1-201ENST00000419456 387 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 HSPE1P27-201ENST00000430808 296 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.41□□□□□ -1.38
SMARCA2P51531 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.41□□□□□ -1.38
SMARCA2P51531 UBTFL9-201ENST00000534504 1148 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC6.41□□□□□ -1.38
SMARCA2P51531 AC006504.3-201ENST00000586818 523 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 AC104984.5-201ENST00000586878 94 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 KC877982.1-201ENST00000602313 470 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 AC006023.1-201ENST00000603944 259 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 AC016590.3-201ENST00000611171 753 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 AL359757.2-201ENST00000624309 274 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SMARCA2P51531 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMARCA2P51531 SRP72P2-201ENST00000344851 1979 ntBASIC6.41□□□□□ -1.38
SMARCA2P51531 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SMARCA2P51531 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMARCA2P51531 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SMARCA2P51531 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.4□□□□□ -1.38
SMARCA2P51531 RNA5SP80-201ENST00000410475 111 ntBASIC6.4□□□□□ -1.38
SMARCA2P51531 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.4□□□□□ -1.38
SMARCA2P51531 RN7SL504P-201ENST00000494496 287 ntBASIC6.4□□□□□ -1.38
SMARCA2P51531 PTGES3P3-201ENST00000511479 482 ntBASIC6.4□□□□□ -1.38
SMARCA2P51531 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.4□□□□□ -1.38
SMARCA2P51531 AL353600.1-201ENST00000608148 251 ntBASIC6.4□□□□□ -1.38
SMARCA2P51531 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.4□□□□□ -1.38
SMARCA2P51531 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
SMARCA2P51531 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SMARCA2P51531 NPM1P38-201ENST00000403835 865 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 AP001992.1-205ENST00000462248 379 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 RPL27AP5-201ENST00000469428 449 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 AC006445.1-201ENST00000491925 405 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.4□□□□□ -1.39
SMARCA2P51531 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.4□□□□□ -1.39
SMARCA2P51531 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.4□□□□□ -1.39
SMARCA2P51531 CKS1BP3-201ENST00000600888 237 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 AL450472.3-201ENST00000615578 367 ntBASIC6.4□□□□□ -1.39
SMARCA2P51531 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMARCA2P51531 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
SMARCA2P51531 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.39□□□□□ -1.39
SMARCA2P51531 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SMARCA2P51531 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMARCA2P51531 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMARCA2P51531 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMARCA2P51531 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
SMARCA2P51531 RNA5SP146-201ENST00000410743 123 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 AC017079.2-201ENST00000416102 485 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 SDCBPP2-201ENST00000424643 885 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 NANOGNBP1-201ENST00000448444 480 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.39□□□□□ -1.39
SMARCA2P51531 S100A11P2-201ENST00000467589 312 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.39□□□□□ -1.39
SMARCA2P51531 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.39□□□□□ -1.39
SMARCA2P51531 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.39□□□□□ -1.39
SMARCA2P51531 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.39□□□□□ -1.39
SMARCA2P51531 AC034105.3-201ENST00000565294 442 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
SMARCA2P51531 DDX18P4-201ENST00000511690 1966 ntBASIC6.39□□□□□ -1.39
SMARCA2P51531 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMARCA2P51531 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC6.38□□□□□ -1.39
SMARCA2P51531 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.38□□□□□ -1.39
SMARCA2P51531 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.38□□□□□ -1.39
SMARCA2P51531 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.38□□□□□ -1.39
SMARCA2P51531 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMARCA2P51531 CCRL1P1-201ENST00000449542 1053 ntBASIC6.38□□□□□ -1.39
SMARCA2P51531 AC010486.1-201ENST00000511793 424 ntBASIC6.38□□□□□ -1.39
SMARCA2P51531 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms