Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 MIR23A-201ENST00000385245 73 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 RNA5SP104-201ENST00000410989 118 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC048351.1-201ENST00000420064 602 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AC092647.1-201ENST00000420654 287 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC006946.1-201ENST00000429106 328 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 AL357520.1-201ENST00000441557 453 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AL133547.1-201ENST00000448546 220 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF9P41273 RPL5P13-201ENST00000462840 709 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AC091564.1-201ENST00000464563 479 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 RPL5P30-201ENST00000465511 891 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 TRMT10BP1-201ENST00000519377 943 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF9P41273 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC092079.1-201ENST00000558620 1985 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 HNRNPCP4-201ENST00000571636 900 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 MTCO2P22-201ENST00000603246 681 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 AC107905.1-201ENST00000616204 426 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 MIR6075-201ENST00000620782 95 ntBASIC4.08□□□□□ -1.76
TNFSF9P41273 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
TNFSF9P41273 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF9P41273 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TNFSF9P41273 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
TNFSF9P41273 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF9P41273 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TNFSF9P41273 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 DDX18P3-201ENST00000404856 2007 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC090971.4-201ENST00000560291 1800 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 ZNF285B-201ENST00000561698 1767 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 SNORA71.3-201ENST00000362582 128 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 RNU6-618P-201ENST00000363518 112 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 SNORA73.2-201ENST00000364946 201 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC073136.2-201ENST00000417282 849 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.07□□□□□ -1.76
TNFSF9P41273 TCEA1P2-201ENST00000420496 906 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AL390879.2-203ENST00000426943 1121 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC010469.1-201ENST00000463864 576 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AP000942.1-201ENST00000463969 747 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 RPS26P15-201ENST00000488067 348 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 UBE2CP3-201ENST00000502715 450 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC025445.1-201ENST00000502728 300 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 CDH12P2-201ENST00000504393 298 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC008011.1-201ENST00000545989 227 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 MIR5187-201ENST00000583479 76 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AL049634.3-201ENST00000604968 457 ntBASIC4.07□□□□□ -1.76
TNFSF9P41273 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF9P41273 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF9P41273 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF9P41273 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF9P41273 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 BDP1P-201ENST00000582658 1990 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF9P41273 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
TNFSF9P41273 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms